Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13710

Experiment: KLEB29 MOI 0.1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS13705 and BWI76_RS13710 overlap by 1 nucleotidesBWI76_RS13710 and BWI76_RS13715 are separated by 9 nucleotides BWI76_RS13705: BWI76_RS13705 - Rieske (2Fe-2S) domain-containing protein, at 2,859,559 to 2,860,941 _RS13705 BWI76_RS13710: BWI76_RS13710 - benzoate 1,2-dioxygenase small subunit, at 2,860,941 to 2,861,426 _RS13710 BWI76_RS13715: BWI76_RS13715 - 2-chlorobenzoate 1 2-dioxygenase electron transfer subunit, at 2,861,436 to 2,862,452 _RS13715 Position (kb) 2860 2861 2862Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2859.946 kb on + strand, within BWI76_RS13705at 2859.954 kb on + strand, within BWI76_RS13705at 2859.972 kb on - strand, within BWI76_RS13705at 2859.974 kb on + strand, within BWI76_RS13705at 2859.974 kb on + strand, within BWI76_RS13705at 2859.974 kb on + strand, within BWI76_RS13705at 2859.974 kb on + strand, within BWI76_RS13705at 2859.974 kb on + strand, within BWI76_RS13705at 2859.982 kb on - strand, within BWI76_RS13705at 2859.982 kb on - strand, within BWI76_RS13705at 2859.982 kb on - strand, within BWI76_RS13705at 2859.982 kb on - strand, within BWI76_RS13705at 2859.982 kb on - strand, within BWI76_RS13705at 2859.982 kb on - strand, within BWI76_RS13705at 2859.989 kb on + strand, within BWI76_RS13705at 2859.997 kb on - strand, within BWI76_RS13705at 2860.049 kb on - strand, within BWI76_RS13705at 2860.050 kb on + strand, within BWI76_RS13705at 2860.055 kb on + strandat 2860.136 kb on + strand, within BWI76_RS13705at 2860.137 kb on + strand, within BWI76_RS13705at 2860.144 kb on - strand, within BWI76_RS13705at 2860.154 kb on - strand, within BWI76_RS13705at 2860.680 kb on + strand, within BWI76_RS13705at 2860.833 kb on + strandat 2860.933 kb on - strandat 2861.043 kb on + strand, within BWI76_RS13710at 2861.065 kb on - strand, within BWI76_RS13710at 2861.295 kb on - strand, within BWI76_RS13710at 2861.316 kb on - strand, within BWI76_RS13710at 2861.740 kb on - strand, within BWI76_RS13715at 2861.740 kb on - strand, within BWI76_RS13715at 2861.740 kb on - strand, within BWI76_RS13715at 2861.815 kb on - strand, within BWI76_RS13715at 2861.902 kb on + strand, within BWI76_RS13715

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Per-strain Table

Position Strand Gene LocusTag Fraction KLEB29 MOI 0.1
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2,859,946 + BWI76_RS13705 0.28 +0.1
2,859,954 + BWI76_RS13705 0.29 -0.2
2,859,972 - BWI76_RS13705 0.30 -0.3
2,859,974 + BWI76_RS13705 0.30 +0.7
2,859,974 + BWI76_RS13705 0.30 +2.6
2,859,974 + BWI76_RS13705 0.30 +0.4
2,859,974 + BWI76_RS13705 0.30 +1.2
2,859,974 + BWI76_RS13705 0.30 -0.0
2,859,982 - BWI76_RS13705 0.31 +1.3
2,859,982 - BWI76_RS13705 0.31 -2.0
2,859,982 - BWI76_RS13705 0.31 +0.9
2,859,982 - BWI76_RS13705 0.31 +1.9
2,859,982 - BWI76_RS13705 0.31 -0.7
2,859,982 - BWI76_RS13705 0.31 -1.3
2,859,989 + BWI76_RS13705 0.31 +0.3
2,859,997 - BWI76_RS13705 0.32 -0.3
2,860,049 - BWI76_RS13705 0.35 -0.4
2,860,050 + BWI76_RS13705 0.36 +0.1
2,860,055 + +1.8
2,860,136 + BWI76_RS13705 0.42 +1.0
2,860,137 + BWI76_RS13705 0.42 +0.7
2,860,144 - BWI76_RS13705 0.42 -0.2
2,860,154 - BWI76_RS13705 0.43 +0.5
2,860,680 + BWI76_RS13705 0.81 -0.4
2,860,833 + +0.8
2,860,933 - -0.2
2,861,043 + BWI76_RS13710 0.21 -0.7
2,861,065 - BWI76_RS13710 0.26 -1.1
2,861,295 - BWI76_RS13710 0.73 -1.1
2,861,316 - BWI76_RS13710 0.77 -0.5
2,861,740 - BWI76_RS13715 0.30 -2.9
2,861,740 - BWI76_RS13715 0.30 +0.4
2,861,740 - BWI76_RS13715 0.30 -0.4
2,861,815 - BWI76_RS13715 0.37 +0.3
2,861,902 + BWI76_RS13715 0.46 -1.9

Or see this region's nucleotide sequence