Experiment: KLEB29 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04965 and BWI76_RS04970 overlap by 4 nucleotides BWI76_RS04970 and BWI76_RS04975 are separated by 121 nucleotides BWI76_RS04975 and BWI76_RS04980 are separated by 57 nucleotides
BWI76_RS04965: BWI76_RS04965 - ABC transporter ATP-binding protein, at 1,042,941 to 1,043,867
_RS04965
BWI76_RS04970: BWI76_RS04970 - ABC transporter permease, at 1,043,864 to 1,044,634
_RS04970
BWI76_RS04975: BWI76_RS04975 - PTS fructose subfamily transporter subunit IIA, at 1,044,756 to 1,045,196
_RS04975
BWI76_RS04980: BWI76_RS04980 - hypothetical protein, at 1,045,254 to 1,046,507
_RS04980
Position (kb) 1044
1045
1046 Strain fitness (log2 ratio) -1
0
1
2
3 at 1043.784 kb on - strand at 1044.143 kb on - strand, within BWI76_RS04970 at 1044.297 kb on + strand, within BWI76_RS04970 at 1044.305 kb on - strand, within BWI76_RS04970 at 1044.654 kb on + strand at 1044.842 kb on + strand, within BWI76_RS04975 at 1044.959 kb on - strand, within BWI76_RS04975 at 1045.356 kb on - strand at 1045.436 kb on - strand, within BWI76_RS04980 at 1045.514 kb on - strand, within BWI76_RS04980 at 1045.691 kb on + strand, within BWI76_RS04980 at 1045.699 kb on - strand, within BWI76_RS04980 at 1045.904 kb on + strand, within BWI76_RS04980 at 1045.912 kb on - strand, within BWI76_RS04980 at 1045.912 kb on - strand, within BWI76_RS04980 at 1046.015 kb on + strand, within BWI76_RS04980 at 1046.017 kb on - strand, within BWI76_RS04980
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB29 MOI 0.1 remove 1,043,784 - -0.4 1,044,143 - BWI76_RS04970 0.36 -0.3 1,044,297 + BWI76_RS04970 0.56 +0.2 1,044,305 - BWI76_RS04970 0.57 -0.2 1,044,654 + -0.9 1,044,842 + BWI76_RS04975 0.20 -0.5 1,044,959 - BWI76_RS04975 0.46 -0.7 1,045,356 - +0.2 1,045,436 - BWI76_RS04980 0.15 -0.4 1,045,514 - BWI76_RS04980 0.21 -0.4 1,045,691 + BWI76_RS04980 0.35 -0.2 1,045,699 - BWI76_RS04980 0.35 -0.8 1,045,904 + BWI76_RS04980 0.52 +3.0 1,045,912 - BWI76_RS04980 0.52 -0.0 1,045,912 - BWI76_RS04980 0.52 +2.3 1,046,015 + BWI76_RS04980 0.61 +0.3 1,046,017 - BWI76_RS04980 0.61 -0.8
Or see this region's nucleotide sequence