Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16825

Experiment: KLEB29 MOI 0.1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS16820 and BWI76_RS16825 overlap by 4 nucleotidesBWI76_RS16825 and BWI76_RS16830 overlap by 4 nucleotides BWI76_RS16820: BWI76_RS16820 - iron ABC transporter, at 3,486,908 to 3,487,960 _RS16820 BWI76_RS16825: BWI76_RS16825 - heme ABC transporter, at 3,487,957 to 3,488,982 _RS16825 BWI76_RS16830: BWI76_RS16830 - ABC transporter, at 3,488,979 to 3,489,800 _RS16830 Position (kb) 3487 3488 3489Strain fitness (log2 ratio) -2 -1 0 1at 3487.049 kb on + strand, within BWI76_RS16820at 3487.075 kb on + strand, within BWI76_RS16820at 3487.353 kb on - strand, within BWI76_RS16820at 3487.378 kb on + strand, within BWI76_RS16820at 3487.656 kb on - strand, within BWI76_RS16820at 3487.656 kb on - strand, within BWI76_RS16820at 3487.738 kb on + strand, within BWI76_RS16820at 3488.148 kb on + strand, within BWI76_RS16825at 3488.253 kb on - strand, within BWI76_RS16825at 3488.499 kb on + strand, within BWI76_RS16825at 3488.599 kb on + strand, within BWI76_RS16825at 3488.607 kb on - strand, within BWI76_RS16825at 3488.667 kb on + strand, within BWI76_RS16825at 3489.236 kb on + strand, within BWI76_RS16830at 3489.349 kb on + strand, within BWI76_RS16830at 3489.441 kb on + strand, within BWI76_RS16830at 3489.450 kb on + strand, within BWI76_RS16830at 3489.461 kb on + strand, within BWI76_RS16830

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Per-strain Table

Position Strand Gene LocusTag Fraction KLEB29 MOI 0.1
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3,487,049 + BWI76_RS16820 0.13 -0.1
3,487,075 + BWI76_RS16820 0.16 -0.1
3,487,353 - BWI76_RS16820 0.42 -0.5
3,487,378 + BWI76_RS16820 0.45 -0.8
3,487,656 - BWI76_RS16820 0.71 -0.2
3,487,656 - BWI76_RS16820 0.71 +1.0
3,487,738 + BWI76_RS16820 0.79 -0.0
3,488,148 + BWI76_RS16825 0.19 -2.1
3,488,253 - BWI76_RS16825 0.29 -0.4
3,488,499 + BWI76_RS16825 0.53 -0.1
3,488,599 + BWI76_RS16825 0.63 -0.6
3,488,607 - BWI76_RS16825 0.63 -0.3
3,488,667 + BWI76_RS16825 0.69 -0.6
3,489,236 + BWI76_RS16830 0.31 -0.1
3,489,349 + BWI76_RS16830 0.45 -1.0
3,489,441 + BWI76_RS16830 0.56 +0.2
3,489,450 + BWI76_RS16830 0.57 +1.6
3,489,461 + BWI76_RS16830 0.59 -0.1

Or see this region's nucleotide sequence