Experiment: KLEB29 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13365 and BWI76_RS13370 are separated by 94 nucleotides BWI76_RS13370 and BWI76_RS13375 are separated by 248 nucleotides BWI76_RS13375 and BWI76_RS13380 are separated by 11 nucleotides BWI76_RS13380 and BWI76_RS13385 are separated by 168 nucleotides BWI76_RS13385 and BWI76_RS13390 overlap by 1 nucleotides
BWI76_RS13365: BWI76_RS13365 - GCN5-like N-acetyltransferase, at 2,787,783 to 2,788,208
_RS13365
BWI76_RS13370: BWI76_RS13370 - hypothetical protein, at 2,788,303 to 2,788,839
_RS13370
BWI76_RS13375: BWI76_RS13375 - protease, at 2,789,088 to 2,791,052
_RS13375
BWI76_RS13380: BWI76_RS13380 - hypothetical protein, at 2,791,064 to 2,791,297
_RS13380
BWI76_RS13385: BWI76_RS13385 - DUF2474 domain-containing protein, at 2,791,466 to 2,791,591
_RS13385
BWI76_RS13390: BWI76_RS13390 - ubiquinol oxidase subunit II, at 2,791,591 to 2,792,601
_RS13390
Position (kb)
2789
2790
2791
2792 Strain fitness (log2 ratio)
-1
0
1 at 2788.548 kb on + strand, within BWI76_RS13370 at 2788.548 kb on + strand, within BWI76_RS13370 at 2788.621 kb on - strand, within BWI76_RS13370 at 2788.680 kb on + strand, within BWI76_RS13370 at 2788.789 kb on - strand at 2788.883 kb on + strand at 2788.933 kb on - strand at 2789.034 kb on - strand at 2789.234 kb on + strand at 2789.387 kb on - strand, within BWI76_RS13375 at 2789.531 kb on + strand, within BWI76_RS13375 at 2789.602 kb on + strand, within BWI76_RS13375 at 2789.612 kb on + strand, within BWI76_RS13375 at 2789.827 kb on - strand, within BWI76_RS13375 at 2790.470 kb on + strand, within BWI76_RS13375 at 2791.123 kb on + strand, within BWI76_RS13380 at 2791.232 kb on + strand, within BWI76_RS13380 at 2791.348 kb on + strand at 2791.609 kb on + strand at 2791.672 kb on + strand at 2791.692 kb on + strand, within BWI76_RS13390 at 2791.692 kb on + strand, within BWI76_RS13390 at 2791.700 kb on - strand, within BWI76_RS13390 at 2791.742 kb on - strand, within BWI76_RS13390 at 2791.948 kb on - strand, within BWI76_RS13390 at 2792.004 kb on + strand, within BWI76_RS13390
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB29 MOI 0.1 remove 2,788,548 + BWI76_RS13370 0.46 +0.8 2,788,548 + BWI76_RS13370 0.46 +0.2 2,788,621 - BWI76_RS13370 0.59 -0.4 2,788,680 + BWI76_RS13370 0.70 +0.0 2,788,789 - +1.0 2,788,883 + -0.1 2,788,933 - -0.2 2,789,034 - -0.5 2,789,234 + -0.6 2,789,387 - BWI76_RS13375 0.15 -1.0 2,789,531 + BWI76_RS13375 0.23 -0.7 2,789,602 + BWI76_RS13375 0.26 -1.0 2,789,612 + BWI76_RS13375 0.27 -0.1 2,789,827 - BWI76_RS13375 0.38 -1.1 2,790,470 + BWI76_RS13375 0.70 -0.6 2,791,123 + BWI76_RS13380 0.25 +1.3 2,791,232 + BWI76_RS13380 0.72 -0.1 2,791,348 + -0.5 2,791,609 + -0.7 2,791,672 + -0.1 2,791,692 + BWI76_RS13390 0.10 -0.6 2,791,692 + BWI76_RS13390 0.10 -0.4 2,791,700 - BWI76_RS13390 0.11 +0.1 2,791,742 - BWI76_RS13390 0.15 +0.9 2,791,948 - BWI76_RS13390 0.35 -0.5 2,792,004 + BWI76_RS13390 0.41 +0.6
Or see this region's nucleotide sequence