Experiment: KLEB29 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07050 and BWI76_RS07055 are separated by 10 nucleotides BWI76_RS07055 and BWI76_RS07060 are separated by 9 nucleotides
BWI76_RS07050: BWI76_RS07050 - putative cytoplasmic protein, at 1,483,353 to 1,484,612
_RS07050
BWI76_RS07055: BWI76_RS07055 - putative cytoplasmic protein, at 1,484,623 to 1,485,426
_RS07055
BWI76_RS07060: BWI76_RS07060 - carbamate kinase, at 1,485,436 to 1,486,329
_RS07060
Position (kb)
1484
1485
1486 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1483.623 kb on - strand, within BWI76_RS07050 at 1483.709 kb on + strand, within BWI76_RS07050 at 1483.889 kb on - strand, within BWI76_RS07050 at 1483.924 kb on - strand, within BWI76_RS07050 at 1483.930 kb on + strand, within BWI76_RS07050 at 1484.028 kb on - strand, within BWI76_RS07050 at 1484.054 kb on + strand, within BWI76_RS07050 at 1484.115 kb on + strand, within BWI76_RS07050 at 1484.194 kb on - strand, within BWI76_RS07050 at 1484.211 kb on - strand at 1484.225 kb on - strand, within BWI76_RS07050 at 1484.226 kb on - strand, within BWI76_RS07050 at 1484.247 kb on - strand, within BWI76_RS07050 at 1484.473 kb on + strand, within BWI76_RS07050 at 1484.606 kb on + strand at 1484.693 kb on + strand at 1484.753 kb on + strand, within BWI76_RS07055 at 1484.761 kb on - strand, within BWI76_RS07055 at 1484.877 kb on + strand, within BWI76_RS07055 at 1485.024 kb on - strand, within BWI76_RS07055 at 1485.050 kb on + strand, within BWI76_RS07055 at 1485.056 kb on + strand, within BWI76_RS07055 at 1485.238 kb on + strand, within BWI76_RS07055 at 1485.246 kb on - strand, within BWI76_RS07055 at 1485.246 kb on - strand, within BWI76_RS07055 at 1485.485 kb on + strand at 1485.605 kb on - strand, within BWI76_RS07060 at 1485.928 kb on - strand, within BWI76_RS07060 at 1486.079 kb on - strand, within BWI76_RS07060 at 1486.271 kb on - strand at 1486.360 kb on + strand at 1486.362 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB29 MOI 0.1 remove 1,483,623 - BWI76_RS07050 0.21 -0.4 1,483,709 + BWI76_RS07050 0.28 -0.5 1,483,889 - BWI76_RS07050 0.43 -1.2 1,483,924 - BWI76_RS07050 0.45 -1.8 1,483,930 + BWI76_RS07050 0.46 -0.6 1,484,028 - BWI76_RS07050 0.54 -0.0 1,484,054 + BWI76_RS07050 0.56 +0.5 1,484,115 + BWI76_RS07050 0.60 -0.1 1,484,194 - BWI76_RS07050 0.67 +2.3 1,484,211 - -0.5 1,484,225 - BWI76_RS07050 0.69 -0.5 1,484,226 - BWI76_RS07050 0.69 -0.9 1,484,247 - BWI76_RS07050 0.71 -1.0 1,484,473 + BWI76_RS07050 0.89 +1.1 1,484,606 + -0.3 1,484,693 + +2.2 1,484,753 + BWI76_RS07055 0.16 -0.3 1,484,761 - BWI76_RS07055 0.17 -1.0 1,484,877 + BWI76_RS07055 0.32 -0.7 1,485,024 - BWI76_RS07055 0.50 -0.9 1,485,050 + BWI76_RS07055 0.53 +0.2 1,485,056 + BWI76_RS07055 0.54 -2.1 1,485,238 + BWI76_RS07055 0.76 -0.8 1,485,246 - BWI76_RS07055 0.77 -0.1 1,485,246 - BWI76_RS07055 0.77 -0.2 1,485,485 + +0.2 1,485,605 - BWI76_RS07060 0.19 +0.4 1,485,928 - BWI76_RS07060 0.55 -1.0 1,486,079 - BWI76_RS07060 0.72 +0.2 1,486,271 - -0.4 1,486,360 + +0.6 1,486,362 + -0.8
Or see this region's nucleotide sequence