Experiment: KLEB29 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02315 and BWI76_RS02320 overlap by 25 nucleotides BWI76_RS02320 and BWI76_RS02325 are separated by 94 nucleotides
BWI76_RS02315: BWI76_RS02315 - protein-disulfide reductase DsbD, at 475,843 to 477,600
_RS02315
BWI76_RS02320: BWI76_RS02320 - divalent ion tolerance protein CutA, at 477,576 to 477,899
_RS02320
BWI76_RS02325: BWI76_RS02325 - anaerobic C4-dicarboxylate transporter, at 477,994 to 479,295
_RS02325
Position (kb) 477
478 Strain fitness (log2 ratio) -1
0
1
2 at 476.586 kb on + strand, within BWI76_RS02315 at 476.686 kb on + strand, within BWI76_RS02315 at 476.694 kb on - strand, within BWI76_RS02315 at 476.786 kb on - strand, within BWI76_RS02315 at 476.878 kb on + strand, within BWI76_RS02315 at 477.006 kb on - strand, within BWI76_RS02315 at 477.252 kb on + strand, within BWI76_RS02315 at 477.353 kb on - strand, within BWI76_RS02315 at 477.423 kb on + strand, within BWI76_RS02315 at 477.453 kb on + strand at 477.461 kb on - strand at 477.573 kb on - strand at 477.681 kb on + strand, within BWI76_RS02320 at 477.793 kb on - strand, within BWI76_RS02320 at 477.837 kb on + strand, within BWI76_RS02320 at 477.844 kb on - strand, within BWI76_RS02320 at 477.860 kb on + strand, within BWI76_RS02320 at 477.868 kb on - strand at 477.881 kb on - strand at 477.929 kb on + strand at 477.972 kb on - strand at 478.046 kb on - strand at 478.060 kb on + strand at 478.098 kb on + strand at 478.201 kb on - strand, within BWI76_RS02325 at 478.211 kb on - strand, within BWI76_RS02325 at 478.336 kb on + strand, within BWI76_RS02325 at 478.346 kb on + strand, within BWI76_RS02325 at 478.472 kb on + strand, within BWI76_RS02325 at 478.480 kb on - strand, within BWI76_RS02325 at 478.538 kb on - strand, within BWI76_RS02325 at 478.543 kb on + strand, within BWI76_RS02325 at 478.548 kb on + strand, within BWI76_RS02325 at 478.556 kb on - strand, within BWI76_RS02325 at 478.617 kb on - strand, within BWI76_RS02325 at 478.671 kb on - strand, within BWI76_RS02325 at 478.677 kb on - strand, within BWI76_RS02325 at 478.794 kb on + strand, within BWI76_RS02325
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB29 MOI 0.1 remove 476,586 + BWI76_RS02315 0.42 +2.7 476,686 + BWI76_RS02315 0.48 +0.9 476,694 - BWI76_RS02315 0.48 +1.1 476,786 - BWI76_RS02315 0.54 +2.0 476,878 + BWI76_RS02315 0.59 -0.4 477,006 - BWI76_RS02315 0.66 -1.2 477,252 + BWI76_RS02315 0.80 +0.5 477,353 - BWI76_RS02315 0.86 -0.6 477,423 + BWI76_RS02315 0.90 -0.8 477,453 + -0.2 477,461 - +1.2 477,573 - -0.4 477,681 + BWI76_RS02320 0.32 +0.7 477,793 - BWI76_RS02320 0.67 -0.7 477,837 + BWI76_RS02320 0.81 -1.1 477,844 - BWI76_RS02320 0.83 -1.2 477,860 + BWI76_RS02320 0.88 -1.1 477,868 - -0.4 477,881 - +0.2 477,929 + -1.1 477,972 - +0.0 478,046 - -0.4 478,060 + +0.0 478,098 + -0.5 478,201 - BWI76_RS02325 0.16 +0.1 478,211 - BWI76_RS02325 0.17 -0.2 478,336 + BWI76_RS02325 0.26 +0.2 478,346 + BWI76_RS02325 0.27 -0.7 478,472 + BWI76_RS02325 0.37 +1.0 478,480 - BWI76_RS02325 0.37 -0.3 478,538 - BWI76_RS02325 0.42 -0.3 478,543 + BWI76_RS02325 0.42 -0.9 478,548 + BWI76_RS02325 0.43 -0.6 478,556 - BWI76_RS02325 0.43 -1.3 478,617 - BWI76_RS02325 0.48 -0.2 478,671 - BWI76_RS02325 0.52 +0.9 478,677 - BWI76_RS02325 0.52 -0.7 478,794 + BWI76_RS02325 0.61 +0.1
Or see this region's nucleotide sequence