Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21010

Experiment: KLEB29 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB29 MOI 1
4,395,592	-		BWI76_RS21005	0.76	+0.6
4,395,596	+		BWI76_RS21005	0.77	-2.3
4,395,596	+				-0.8
4,395,604	-		BWI76_RS21005	0.77	-0.9
4,395,604	-		BWI76_RS21005	0.77	+0.8
4,395,604	-		BWI76_RS21005	0.77	-0.0
4,395,604	-		BWI76_RS21005	0.77	-1.4
4,395,604	-		BWI76_RS21005	0.77	+0.8
4,395,604	-		BWI76_RS21005	0.77	-3.7
4,395,604	-		BWI76_RS21005	0.77	-0.8
4,395,604	-		BWI76_RS21005	0.77	-2.1
4,395,611	-		BWI76_RS21005	0.77	+3.5
4,395,612	-		BWI76_RS21005	0.77	+0.9
4,395,614	-		BWI76_RS21005	0.77	-2.9
4,395,614	-		BWI76_RS21005	0.77	+0.4
4,395,614	-		BWI76_RS21005	0.77	-1.2
4,395,630	+		BWI76_RS21005	0.78	+1.1
4,395,638	-		BWI76_RS21005	0.78	+0.2
4,395,639	+		BWI76_RS21005	0.78	+2.3
4,395,647	-		BWI76_RS21005	0.79	-0.0
4,395,647	-		BWI76_RS21005	0.79	-1.8
4,395,647	-		BWI76_RS21005	0.79	-2.3
4,395,649	+		BWI76_RS21005	0.79	+0.2
4,395,649	+		BWI76_RS21005	0.79	-2.7
4,395,657	-		BWI76_RS21005	0.79	+0.7
4,395,662	-		BWI76_RS21005	0.80	+0.2
4,395,662	-		BWI76_RS21005	0.80	-2.4
4,395,674	+		BWI76_RS21005	0.80	+1.5
4,395,674	+		BWI76_RS21005	0.80	+0.8
4,395,682	-		BWI76_RS21005	0.80	+0.2
4,395,685	-				+0.8
4,395,707	+		BWI76_RS21005	0.82	+0.8
4,395,828	-		BWI76_RS21005	0.87	-3.2
4,395,873	+		BWI76_RS21005	0.89	-1.8
4,395,873	+		BWI76_RS21005	0.89	-2.4
4,395,873	+		BWI76_RS21005	0.89	+0.1
4,395,881	-		BWI76_RS21005	0.89	-1.8
4,395,881	-		BWI76_RS21005	0.89	+0.4
4,395,881	-		BWI76_RS21005	0.89	+0.7
4,395,883	+		BWI76_RS21005	0.89	-1.5
4,395,885	+		BWI76_RS21005	0.90	-2.0
4,395,890	+		BWI76_RS21005	0.90	+0.5
4,395,893	-		BWI76_RS21005	0.90	-0.5
4,395,898	-				-0.5
4,395,919	+				+0.2
4,395,922	-				+0.3
4,395,945	+				+1.8
4,395,945	+				-0.2
4,395,952	+				+0.3
4,395,957	+				-0.4
4,395,957	+				+0.8
4,395,963	-				-2.0
4,395,964	+				+2.1
4,395,965	-				+1.2
4,395,965	-				-0.7
4,395,969	+				+1.7
4,395,972	-				-2.7
4,395,972	-				-0.2
4,395,984	+				-0.2
4,396,013	-				-0.5
4,396,016	+				+0.4
4,396,016	+				+0.8
4,396,016	+				-0.1
4,396,016	+				+0.4
4,396,016	+				+0.2
4,396,016	+				+0.5
4,396,016	+				+1.1
4,396,016	+				-0.5
4,396,016	+				-0.1
4,396,016	+				+0.2
4,396,016	+				-1.2
4,396,016	+				+2.4
4,396,024	-				-0.0
4,396,024	-				-1.0
4,396,024	-				-1.3
4,396,024	-				+1.0
4,396,024	-				-0.5
4,396,024	-				+1.4
4,396,024	-				+0.8
4,396,024	-				-1.4
4,396,024	-				+2.0
4,396,024	-				-1.5
4,396,024	-				+2.1
4,396,024	-				-2.2
4,396,024	-				+1.5
4,396,024	-				+1.8
4,396,024	-				-1.5
4,396,024	-				-0.0
4,396,024	-				-4.0
4,396,033	-				+0.8
4,396,038	-				-1.0
4,396,039	+				-2.4
4,396,039	+				+0.5
4,396,047	-				+0.5
4,396,052	+				-0.4
4,396,052	+				-0.8
4,396,052	+				+0.5
4,396,052	+				-1.5
4,396,052	+				+1.5
4,396,060	-				+0.8
4,396,060	-				+1.3
4,396,060	-				+1.1
4,396,060	-				-1.5
4,396,092	+				-1.6
4,396,099	-				-1.1
4,396,099	-				+1.4
4,396,101	-				-0.6
4,396,128	+				+1.1
4,396,131	-				-1.3
4,396,134	+				+0.3
4,396,135	+				+0.8
4,396,142	-				+1.6
4,396,143	-				-0.9
4,396,148	+				+0.8
4,396,148	+				+0.7
4,396,156	-				+0.5
4,396,156	-				+0.8
4,396,156	-				+0.1
4,396,156	-				-0.4
4,396,167	-				+0.7
4,396,173	-				-0.6
4,396,183	-				-0.5
4,396,192	+				-2.8
4,396,192	+				-1.8
4,396,194	+				+0.8
4,396,200	-				-0.1
4,396,200	-				-0.8
4,396,200	-				-0.0
4,396,207	+				-0.8
4,396,210	-				-0.0
4,396,210	-				+0.1
4,396,316	+				-1.9
4,396,317	-				+0.8
4,396,324	-				-0.6
4,396,394	+				-0.5
4,396,394	+				-0.6
4,396,402	-				-0.1
4,396,408	+				-1.5
4,396,408	+				+2.0
4,396,411	-				-1.5
4,396,416	-				+0.3
4,396,418	+				+0.8
4,396,421	-				+0.3
4,396,426	-				-0.2
4,396,426	-				+0.6
4,396,431	-				+1.4
4,396,452	+				+2.4
4,396,460	-				+0.2
4,396,481	+				-0.9
4,396,483	+				-1.7
4,396,489	-				-0.4
4,396,503	+				+1.5
4,396,529	-		BWI76_RS21010	0.22	-0.7
4,396,542	+		BWI76_RS21010	0.29	-0.5
4,396,549	-				+0.8
4,396,562	-		BWI76_RS21010	0.39	-2.0
4,396,568	+		BWI76_RS21010	0.42	-0.5
4,396,643	-		BWI76_RS21010	0.81	-1.1
4,396,652	-		BWI76_RS21010	0.86	-1.1
4,396,861	+		BWI76_RS21015	0.19	+1.5
4,396,864	-		BWI76_RS21015	0.19	-0.3
4,396,877	-		BWI76_RS21015	0.20	+1.6
4,396,908	-		BWI76_RS21015	0.24	-1.5
4,396,909	-		BWI76_RS21015	0.24	+1.8
4,396,917	+		BWI76_RS21015	0.25	-0.2
4,396,947	-		BWI76_RS21015	0.28	+0.8
4,397,468	+		BWI76_RS21015	0.87	+0.2
4,397,480	-		BWI76_RS21015	0.88	-0.5
4,397,627	+				-0.8