Experiment: KLEB29 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18585 and BWI76_RS18590 overlap by 1 nucleotides BWI76_RS18590 and BWI76_RS18595 are separated by 139 nucleotides BWI76_RS18595 and BWI76_RS18600 are separated by 14 nucleotides BWI76_RS18600 and BWI76_RS18605 overlap by 11 nucleotides
BWI76_RS18585: BWI76_RS18585 - two-component sensor histidine kinase, at 3,854,485 to 3,855,903
_RS18585
BWI76_RS18590: BWI76_RS18590 - DNA-binding response regulator, at 3,855,903 to 3,856,571
_RS18590
BWI76_RS18595: BWI76_RS18595 - hypothetical protein, at 3,856,711 to 3,857,337
_RS18595
BWI76_RS18600: BWI76_RS18600 - HupC/HyaC/HydC family protein, at 3,857,352 to 3,857,960
_RS18600
BWI76_RS18605: BWI76_RS18605 - oxidoreductase molybdopterin-binding protein, at 3,857,950 to 3,858,717
_RS18605
Position (kb)
3856
3857
3858 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3855.758 kb on - strand, within BWI76_RS18585 at 3855.948 kb on - strand at 3856.161 kb on - strand, within BWI76_RS18590 at 3856.271 kb on - strand, within BWI76_RS18590 at 3856.325 kb on - strand, within BWI76_RS18590 at 3856.412 kb on + strand, within BWI76_RS18590 at 3856.420 kb on - strand, within BWI76_RS18590 at 3856.516 kb on - strand at 3856.517 kb on - strand at 3856.608 kb on - strand at 3856.655 kb on + strand at 3856.663 kb on - strand at 3856.663 kb on - strand at 3856.778 kb on - strand, within BWI76_RS18595 at 3856.823 kb on - strand, within BWI76_RS18595 at 3857.059 kb on + strand, within BWI76_RS18595 at 3857.237 kb on - strand, within BWI76_RS18595 at 3857.384 kb on - strand at 3857.398 kb on - strand at 3857.416 kb on - strand, within BWI76_RS18600 at 3857.540 kb on + strand, within BWI76_RS18600 at 3857.572 kb on - strand, within BWI76_RS18600 at 3857.585 kb on + strand, within BWI76_RS18600 at 3857.676 kb on - strand, within BWI76_RS18600 at 3857.737 kb on - strand, within BWI76_RS18600 at 3857.795 kb on + strand, within BWI76_RS18600 at 3858.065 kb on + strand, within BWI76_RS18605 at 3858.180 kb on + strand, within BWI76_RS18605 at 3858.189 kb on - strand, within BWI76_RS18605
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB29 MOI 1 remove 3,855,758 - BWI76_RS18585 0.90 -2.0 3,855,948 - +0.0 3,856,161 - BWI76_RS18590 0.39 -2.2 3,856,271 - BWI76_RS18590 0.55 +4.1 3,856,325 - BWI76_RS18590 0.63 -0.2 3,856,412 + BWI76_RS18590 0.76 -2.2 3,856,420 - BWI76_RS18590 0.77 -0.6 3,856,516 - +0.7 3,856,517 - -0.2 3,856,608 - -2.2 3,856,655 + -0.1 3,856,663 - -0.7 3,856,663 - -0.1 3,856,778 - BWI76_RS18595 0.11 +0.0 3,856,823 - BWI76_RS18595 0.18 -1.8 3,857,059 + BWI76_RS18595 0.56 -0.3 3,857,237 - BWI76_RS18595 0.84 -1.3 3,857,384 - -2.2 3,857,398 - +0.1 3,857,416 - BWI76_RS18600 0.11 -0.4 3,857,540 + BWI76_RS18600 0.31 +0.3 3,857,572 - BWI76_RS18600 0.36 -0.4 3,857,585 + BWI76_RS18600 0.38 -0.2 3,857,676 - BWI76_RS18600 0.53 +2.6 3,857,737 - BWI76_RS18600 0.63 -0.8 3,857,795 + BWI76_RS18600 0.73 -1.0 3,858,065 + BWI76_RS18605 0.15 +0.1 3,858,180 + BWI76_RS18605 0.30 +0.0 3,858,189 - BWI76_RS18605 0.31 -0.6
Or see this region's nucleotide sequence