Experiment: KLEB29 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17205 and BWI76_RS17210 are separated by 34 nucleotides BWI76_RS17210 and BWI76_RS17215 are separated by 67 nucleotides BWI76_RS17215 and BWI76_RS17220 are separated by 45 nucleotides
BWI76_RS17205: BWI76_RS17205 - cardiolipin synthase A, at 3,563,938 to 3,565,398
_RS17205
BWI76_RS17210: BWI76_RS17210 - dsDNA-mimic protein, at 3,565,433 to 3,565,762
_RS17210
BWI76_RS17215: BWI76_RS17215 - transporter, at 3,565,830 to 3,566,667
_RS17215
BWI76_RS17220: BWI76_RS17220 - oligopeptide ABC transporter ATP-binding protein OppF, at 3,566,713 to 3,567,717
_RS17220
Position (kb)
3565
3566 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3564.598 kb on - strand, within BWI76_RS17205 at 3564.913 kb on - strand, within BWI76_RS17205 at 3565.201 kb on - strand, within BWI76_RS17205 at 3565.325 kb on + strand at 3565.400 kb on - strand at 3565.600 kb on - strand, within BWI76_RS17210 at 3565.602 kb on + strand, within BWI76_RS17210 at 3565.607 kb on - strand, within BWI76_RS17210 at 3565.629 kb on + strand, within BWI76_RS17210 at 3565.658 kb on + strand, within BWI76_RS17210 at 3565.702 kb on - strand, within BWI76_RS17210 at 3565.735 kb on - strand at 3565.740 kb on + strand at 3565.740 kb on + strand at 3565.740 kb on + strand at 3565.740 kb on + strand at 3565.740 kb on + strand at 3565.740 kb on + strand at 3565.740 kb on + strand at 3565.740 kb on + strand at 3565.740 kb on + strand at 3565.740 kb on + strand at 3565.740 kb on + strand at 3565.740 kb on + strand at 3565.740 kb on + strand at 3565.748 kb on - strand at 3565.748 kb on - strand at 3565.748 kb on - strand at 3565.748 kb on - strand at 3565.748 kb on - strand at 3565.748 kb on - strand at 3565.798 kb on - strand at 3565.841 kb on + strand at 3565.908 kb on + strand at 3565.916 kb on + strand, within BWI76_RS17215 at 3565.916 kb on + strand, within BWI76_RS17215 at 3565.936 kb on + strand, within BWI76_RS17215 at 3566.006 kb on - strand, within BWI76_RS17215 at 3566.034 kb on - strand, within BWI76_RS17215 at 3566.197 kb on + strand, within BWI76_RS17215 at 3566.198 kb on - strand, within BWI76_RS17215 at 3566.207 kb on + strand, within BWI76_RS17215 at 3566.210 kb on - strand, within BWI76_RS17215 at 3566.215 kb on - strand, within BWI76_RS17215 at 3566.220 kb on - strand, within BWI76_RS17215 at 3566.244 kb on + strand, within BWI76_RS17215 at 3566.259 kb on + strand, within BWI76_RS17215 at 3566.321 kb on - strand, within BWI76_RS17215 at 3566.323 kb on + strand, within BWI76_RS17215 at 3566.325 kb on + strand, within BWI76_RS17215 at 3566.326 kb on - strand, within BWI76_RS17215 at 3566.345 kb on + strand, within BWI76_RS17215 at 3566.433 kb on + strand, within BWI76_RS17215 at 3566.441 kb on - strand, within BWI76_RS17215 at 3566.469 kb on + strand, within BWI76_RS17215 at 3566.477 kb on - strand, within BWI76_RS17215 at 3566.560 kb on - strand, within BWI76_RS17215 at 3566.560 kb on - strand, within BWI76_RS17215 at 3566.560 kb on - strand, within BWI76_RS17215 at 3566.562 kb on + strand, within BWI76_RS17215 at 3566.700 kb on - strand at 3566.719 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB29 MOI 1 remove 3,564,598 - BWI76_RS17205 0.45 +0.6 3,564,913 - BWI76_RS17205 0.67 +3.0 3,565,201 - BWI76_RS17205 0.86 +0.8 3,565,325 + +2.4 3,565,400 - +0.6 3,565,600 - BWI76_RS17210 0.51 -1.4 3,565,602 + BWI76_RS17210 0.51 -1.0 3,565,607 - BWI76_RS17210 0.53 -1.3 3,565,629 + BWI76_RS17210 0.59 -0.6 3,565,658 + BWI76_RS17210 0.68 -2.3 3,565,702 - BWI76_RS17210 0.82 -0.2 3,565,735 - +4.2 3,565,740 + -1.9 3,565,740 + +0.8 3,565,740 + +0.2 3,565,740 + +0.1 3,565,740 + +0.1 3,565,740 + +1.0 3,565,740 + +0.4 3,565,740 + -1.6 3,565,740 + -0.4 3,565,740 + -0.4 3,565,740 + -0.9 3,565,740 + +1.0 3,565,740 + +0.1 3,565,748 - -0.3 3,565,748 - -0.3 3,565,748 - -0.1 3,565,748 - -0.1 3,565,748 - +0.0 3,565,748 - -0.6 3,565,798 - -1.0 3,565,841 + -0.3 3,565,908 + +2.2 3,565,916 + BWI76_RS17215 0.10 +0.9 3,565,916 + BWI76_RS17215 0.10 -1.3 3,565,936 + BWI76_RS17215 0.13 +1.0 3,566,006 - BWI76_RS17215 0.21 +0.6 3,566,034 - BWI76_RS17215 0.24 +1.2 3,566,197 + BWI76_RS17215 0.44 -1.0 3,566,198 - BWI76_RS17215 0.44 +0.2 3,566,207 + BWI76_RS17215 0.45 +0.2 3,566,210 - BWI76_RS17215 0.45 +2.2 3,566,215 - BWI76_RS17215 0.46 +2.0 3,566,220 - BWI76_RS17215 0.47 +0.6 3,566,244 + BWI76_RS17215 0.49 +0.5 3,566,259 + BWI76_RS17215 0.51 -0.3 3,566,321 - BWI76_RS17215 0.59 -2.7 3,566,323 + BWI76_RS17215 0.59 +0.5 3,566,325 + BWI76_RS17215 0.59 +1.0 3,566,326 - BWI76_RS17215 0.59 +2.7 3,566,345 + BWI76_RS17215 0.61 +2.5 3,566,433 + BWI76_RS17215 0.72 -0.5 3,566,441 - BWI76_RS17215 0.73 +0.1 3,566,469 + BWI76_RS17215 0.76 -0.4 3,566,477 - BWI76_RS17215 0.77 +1.0 3,566,560 - BWI76_RS17215 0.87 -1.7 3,566,560 - BWI76_RS17215 0.87 +0.0 3,566,560 - BWI76_RS17215 0.87 +0.4 3,566,562 + BWI76_RS17215 0.87 +0.2 3,566,700 - -0.5 3,566,719 - +1.0
Or see this region's nucleotide sequence