Experiment: KLEB29 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15930 and BWI76_RS15935 are separated by 1 nucleotides BWI76_RS15935 and BWI76_RS15940 are separated by 41 nucleotides BWI76_RS15940 and BWI76_RS15945 are separated by 139 nucleotides
BWI76_RS15930: BWI76_RS15930 - dimethylsulfoxide reductase, chain B, at 3,304,705 to 3,305,322
_RS15930
BWI76_RS15935: BWI76_RS15935 - dimethyl sulfoxide reductase, at 3,305,324 to 3,306,181
_RS15935
BWI76_RS15940: BWI76_RS15940 - DMSO reductase maturation protein DsmD, at 3,306,223 to 3,306,831
_RS15940
BWI76_RS15945: BWI76_RS15945 - voltage-gated ClC-type chloride channel ClcB, at 3,306,971 to 3,308,266
_RS15945
Position (kb) 3306
3307 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 3305.723 kb on + strand, within BWI76_RS15935 at 3306.388 kb on + strand, within BWI76_RS15940 at 3306.753 kb on - strand, within BWI76_RS15940 at 3306.795 kb on + strand at 3306.809 kb on + strand at 3306.832 kb on + strand at 3307.119 kb on + strand, within BWI76_RS15945 at 3307.760 kb on - strand, within BWI76_RS15945
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB29 MOI 1 remove 3,305,723 + BWI76_RS15935 0.47 +0.1 3,306,388 + BWI76_RS15940 0.27 -0.7 3,306,753 - BWI76_RS15940 0.87 -3.1 3,306,795 + -1.0 3,306,809 + -0.5 3,306,832 + -0.5 3,307,119 + BWI76_RS15945 0.11 +0.5 3,307,760 - BWI76_RS15945 0.61 -0.7
Or see this region's nucleotide sequence