Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14925
Experiment: KLEB29 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB29 MOI 1 |
---|---|---|---|---|---|
remove | |||||
3,127,426 | + | +1.9 | |||
3,127,541 | - | BWI76_RS14920 | 0.14 | -0.6 | |
3,127,616 | + | BWI76_RS14920 | 0.21 | +1.5 | |
3,127,710 | - | BWI76_RS14920 | 0.30 | +2.9 | |
3,127,763 | + | BWI76_RS14920 | 0.36 | +0.0 | |
3,127,771 | - | BWI76_RS14920 | 0.37 | +0.0 | |
3,127,777 | - | BWI76_RS14920 | 0.37 | -0.2 | |
3,127,856 | + | BWI76_RS14920 | 0.45 | +0.2 | |
3,128,045 | + | BWI76_RS14920 | 0.64 | -0.2 | |
3,128,169 | - | BWI76_RS14920 | 0.76 | -0.4 | |
3,128,190 | + | BWI76_RS14920 | 0.78 | +1.6 | |
3,128,233 | - | BWI76_RS14920 | 0.82 | -0.8 | |
3,128,385 | - | +1.1 | |||
3,128,672 | - | BWI76_RS14925 | 0.28 | +0.2 | |
3,128,743 | + | BWI76_RS14925 | 0.35 | -0.3 | |
3,128,910 | - | BWI76_RS14925 | 0.53 | -1.0 | |
3,128,915 | - | BWI76_RS14925 | 0.53 | -2.8 | |
3,129,255 | + | BWI76_RS14925 | 0.89 | -1.7 | |
3,129,288 | - | -1.3 | |||
3,129,397 | + | +0.5 | |||
3,129,607 | + | BWI76_RS14930 | 0.27 | +0.2 |
Or see this region's nucleotide sequence