Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14695

Experiment: KLEB29 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB29 MOI 1
3,083,512	-				+0.3
3,083,712	+		BWI76_RS14690	0.25	-1.0
3,083,894	-		BWI76_RS14690	0.50	-1.9
3,084,099	+		BWI76_RS14690	0.78	+2.2
3,084,107	-		BWI76_RS14690	0.79	+0.2
3,084,107	-		BWI76_RS14690	0.79	-0.1
3,084,180	-		BWI76_RS14690	0.89	+1.0
3,084,180	-		BWI76_RS14690	0.89	-0.3
3,084,190	-				+0.3
3,084,335	-				+0.8
3,084,369	+				+0.7
3,084,462	-				+0.9
3,084,549	-		BWI76_RS14695	0.11	+0.1
3,084,923	-		BWI76_RS14695	0.26	-0.5
3,084,923	-		BWI76_RS14695	0.26	+0.7
3,085,164	-				-0.7
3,085,171	+		BWI76_RS14695	0.36	-0.2
3,085,237	-		BWI76_RS14695	0.38	-0.7
3,085,296	+		BWI76_RS14695	0.41	-2.0
3,085,296	+		BWI76_RS14695	0.41	-1.1
3,085,304	-		BWI76_RS14695	0.41	-0.5
3,085,327	-		BWI76_RS14695	0.42	-0.6
3,085,418	-		BWI76_RS14695	0.45	-0.9
3,085,562	+		BWI76_RS14695	0.51	+2.3
3,085,659	-		BWI76_RS14695	0.55	-0.8
3,085,759	+		BWI76_RS14695	0.59	+2.2
3,085,872	-		BWI76_RS14695	0.64	-1.0
3,085,975	+		BWI76_RS14695	0.68	-1.2
3,086,111	+		BWI76_RS14695	0.73	+2.3
3,086,238	-		BWI76_RS14695	0.78	+0.7
3,086,316	-		BWI76_RS14695	0.81	-1.0
3,086,335	-		BWI76_RS14695	0.82	+0.7
3,086,457	+		BWI76_RS14695	0.87	+1.6
3,086,465	-		BWI76_RS14695	0.87	-0.2
3,086,465	-		BWI76_RS14695	0.87	+0.2
3,086,465	-		BWI76_RS14695	0.87	-0.7
3,086,485	+				-0.3
3,086,493	-		BWI76_RS14695	0.88	+0.5
3,086,498	-		BWI76_RS14695	0.89	-0.1
3,086,498	-		BWI76_RS14695	0.89	-2.1
3,086,501	+		BWI76_RS14695	0.89	-1.0
3,086,502	+				+1.3
3,086,504	+		BWI76_RS14695	0.89	-1.5
3,086,509	-		BWI76_RS14695	0.89	+0.3
3,086,509	-		BWI76_RS14695	0.89	+0.3
3,086,509	-		BWI76_RS14695	0.89	+1.1
3,086,509	-		BWI76_RS14695	0.89	+1.9
3,086,527	-		BWI76_RS14695	0.90	-2.3
3,086,544	+				-1.7
3,086,552	-				+0.7
3,086,552	-				-1.3
3,086,552	-				+0.4
3,086,552	-				+1.3
3,086,552	-				+0.3
3,086,552	-				-0.5
3,086,586	-				-1.5
3,086,586	-				+1.4
3,086,586	-				+1.0
3,086,592	-				+2.7
3,086,596	-				-0.6
3,086,598	-				+1.9
3,086,606	-				+0.9
3,086,654	-				-0.3
3,086,704	+				+0.3
3,086,761	-				+1.3
3,086,761	-				+0.7
3,086,893	-				-0.3
3,086,941	-				+2.5
3,086,941	-				-1.5
3,086,945	-				+0.3
3,087,053	-				+1.3
3,087,078	-		BWI76_RS14700	0.34	+1.3
3,087,078	-		BWI76_RS14700	0.34	+0.3
3,087,078	-		BWI76_RS14700	0.34	-0.2
3,087,078	-		BWI76_RS14700	0.34	+0.3
3,087,085	-		BWI76_RS14700	0.36	+1.6
3,087,192	-		BWI76_RS14700	0.56	-1.8
3,087,277	-		BWI76_RS14700	0.72	+2.8
3,087,284	+		BWI76_RS14700	0.73	-2.0
3,087,298	+		BWI76_RS14700	0.76	+0.3
3,087,303	+				+1.3
3,087,338	+		BWI76_RS14700	0.83	-0.3
3,087,338	+		BWI76_RS14700	0.83	-0.0
3,087,344	+		BWI76_RS14700	0.84	-0.7
3,087,345	+		BWI76_RS14700	0.84	+0.7
3,087,345	+		BWI76_RS14700	0.84	-1.0
3,087,345	+		BWI76_RS14700	0.84	+0.2
3,087,345	+		BWI76_RS14700	0.84	-0.3
3,087,345	+		BWI76_RS14700	0.84	+1.1
3,087,345	+		BWI76_RS14700	0.84	+1.3
3,087,345	+		BWI76_RS14700	0.84	+1.3
3,087,345	+		BWI76_RS14700	0.84	-0.3
3,087,345	+		BWI76_RS14700	0.84	+1.8
3,087,345	+		BWI76_RS14700	0.84	+0.4
3,087,345	+		BWI76_RS14700	0.84	+1.3
3,087,345	+		BWI76_RS14700	0.84	-1.7
3,087,345	+		BWI76_RS14700	0.84	-0.3
3,087,345	+		BWI76_RS14700	0.84	+0.6
3,087,345	+		BWI76_RS14700	0.84	-0.7
3,087,345	+		BWI76_RS14700	0.84	+1.1
3,087,345	+		BWI76_RS14700	0.84	+1.7
3,087,345	+		BWI76_RS14700	0.84	-1.5
3,087,345	+		BWI76_RS14700	0.84	-2.1
3,087,345	+				+0.3
3,087,345	+		BWI76_RS14700	0.84	+1.3
3,087,345	+		BWI76_RS14700	0.84	+1.3
3,087,345	+		BWI76_RS14700	0.84	-0.4
3,087,345	+		BWI76_RS14700	0.84	+0.5
3,087,345	+		BWI76_RS14700	0.84	+1.3
3,087,345	+		BWI76_RS14700	0.84	+1.3
3,087,350	+		BWI76_RS14700	0.85	+0.2
3,087,350	+		BWI76_RS14700	0.85	+0.3
3,087,350	+		BWI76_RS14700	0.85	-1.7
3,087,350	+				+0.3
3,087,350	+		BWI76_RS14700	0.85	-0.6
3,087,353	-		BWI76_RS14700	0.86	+2.3
3,087,353	-				+2.9
3,087,353	-		BWI76_RS14700	0.86	-0.7
3,087,353	-		BWI76_RS14700	0.86	-1.3
3,087,353	-		BWI76_RS14700	0.86	-2.3
3,087,353	-		BWI76_RS14700	0.86	-1.7
3,087,355	+		BWI76_RS14700	0.86	+0.8
3,087,355	+		BWI76_RS14700	0.86	-0.7
3,087,355	+				-0.7
3,087,355	+		BWI76_RS14700	0.86	+2.7
3,087,355	+		BWI76_RS14700	0.86	+1.3
3,087,358	-		BWI76_RS14700	0.87	-1.5
3,087,358	-				+1.3
3,087,363	-		BWI76_RS14700	0.88	+0.3
3,087,364	+		BWI76_RS14700	0.88	+0.3
3,087,437	+				+0.8
3,087,437	+				+0.5
3,087,486	+				+0.1
3,087,494	-				+0.4
3,087,494	-				-0.6
3,087,494	-				-1.4
3,087,494	-				+1.0
3,087,494	-				-1.0
3,087,494	-				-1.1
3,087,494	-				+0.8
3,087,494	-				+2.3
3,087,494	-				+0.3
3,087,494	-				+0.7
3,087,494	-				+0.3
3,087,494	-				-2.1
3,087,494	-				-0.3
3,087,494	-				+0.2
3,087,494	-				-0.6
3,087,494	-				-0.4
3,087,494	-				-0.2
3,087,500	-				-0.7
3,087,509	+				-1.3
3,087,517	-				-2.1
3,087,517	-				+0.5
3,087,517	-				-0.1
3,087,522	-				-2.7
3,087,524	-				-0.3
3,087,524	-				+0.2
3,087,535	-				+0.9
3,087,547	+				+0.4
3,087,550	-		BWI76_RS14705	0.10	-0.9
3,087,588	-		BWI76_RS14705	0.17	+2.5
3,087,596	-		BWI76_RS14705	0.18	-0.3
3,087,596	-		BWI76_RS14705	0.18	-1.7
3,087,605	-		BWI76_RS14705	0.20	-1.7
3,087,605	-				+0.3
3,087,633	-		BWI76_RS14705	0.25	-1.1
3,087,633	-		BWI76_RS14705	0.25	+1.3
3,087,633	-		BWI76_RS14705	0.25	-0.5
3,087,635	+		BWI76_RS14705	0.26	-0.9
3,087,639	-		BWI76_RS14705	0.26	-0.7
3,087,653	+		BWI76_RS14705	0.29	-1.3
3,087,658	+		BWI76_RS14705	0.30	+0.3
3,087,693	-		BWI76_RS14705	0.36	+2.3
3,087,762	-		BWI76_RS14705	0.49	+0.5
3,087,768	-		BWI76_RS14705	0.50	-0.6
3,087,768	-		BWI76_RS14705	0.50	+1.9
3,087,768	-		BWI76_RS14705	0.50	-1.1
3,087,768	-		BWI76_RS14705	0.50	-1.5
3,087,768	-				+1.3