Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14505
Experiment: KLEB29 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB29 MOI 1 |
---|---|---|---|---|---|
remove | |||||
3,027,675 | - | BWI76_RS14500 | 0.45 | -0.6 | |
3,027,695 | - | BWI76_RS14500 | 0.47 | -2.4 | |
3,027,707 | + | BWI76_RS14500 | 0.47 | +1.3 | |
3,027,798 | - | BWI76_RS14500 | 0.54 | -1.7 | |
3,027,852 | + | BWI76_RS14500 | 0.58 | -0.5 | |
3,027,874 | + | BWI76_RS14500 | 0.59 | -1.1 | |
3,028,049 | - | BWI76_RS14500 | 0.72 | +1.4 | |
3,028,203 | - | BWI76_RS14500 | 0.83 | -0.1 | |
3,028,251 | + | BWI76_RS14500 | 0.86 | +1.1 | |
3,028,342 | + | +0.7 | |||
3,028,426 | - | -3.0 | |||
3,028,527 | - | -0.0 | |||
3,028,527 | - | -0.3 | |||
3,028,565 | - | +0.6 | |||
3,028,983 | - | BWI76_RS14505 | 0.36 | -2.1 | |
3,029,349 | - | BWI76_RS14505 | 0.64 | -0.8 | |
3,029,734 | - | -2.7 | |||
3,030,343 | - | BWI76_RS14510 | 0.39 | -0.0 | |
3,030,519 | + | BWI76_RS14510 | 0.53 | +0.7 | |
3,030,530 | + | BWI76_RS14510 | 0.53 | -0.1 | |
3,030,653 | + | BWI76_RS14510 | 0.63 | +0.6 | |
3,030,661 | - | BWI76_RS14510 | 0.64 | +0.8 |
Or see this region's nucleotide sequence