Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11400

Experiment: KLEB29 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB29 MOI 1
2,402,309	-		BWI76_RS11390	0.87	+1.1
2,402,412	+				+0.3
2,402,582	-		BWI76_RS11395	0.30	+1.5
2,402,707	-		BWI76_RS11395	0.54	-0.7
2,402,819	-		BWI76_RS11395	0.75	-0.3
2,402,862	-		BWI76_RS11395	0.84	-0.0
2,402,882	+		BWI76_RS11395	0.87	-1.4
2,402,890	-		BWI76_RS11395	0.89	+0.1
2,402,925	-				+0.8
2,403,133	+				+0.1
2,403,155	+		BWI76_RS11400	0.18	+0.9
2,403,163	-		BWI76_RS11400	0.23	-1.4
2,403,165	-		BWI76_RS11400	0.24	+0.5
2,403,165	-		BWI76_RS11400	0.24	-1.4
2,403,188	+		BWI76_RS11400	0.39	+1.9
2,403,238	+		BWI76_RS11400	0.72	-0.2
2,403,238	+		BWI76_RS11400	0.72	-1.4
2,403,238	+		BWI76_RS11400	0.72	-0.7
2,403,238	+		BWI76_RS11400	0.72	+1.1
2,403,248	+		BWI76_RS11400	0.78	-0.6
2,403,350	+				-0.1
2,403,404	+				+0.9
2,403,412	-				-0.1
2,403,421	+				+0.8
2,403,451	+				-0.0
2,403,451	+				-0.4
2,403,461	+				-1.7
2,403,480	-				-0.8
2,403,487	+				+2.8
2,403,487	+				+0.6
2,403,487	+				+0.3
2,403,487	+				-0.1
2,403,488	+				-0.1
2,403,509	+				-0.7
2,403,521	+				-0.7
2,403,530	+				-0.2
2,403,537	-				-0.1
2,403,539	-				-1.4
2,403,545	+				+0.9
2,403,545	+				-1.4
2,403,545	+				-0.4
2,403,553	-				+0.0
2,403,555	+				-0.9
2,403,555	+				-0.7
2,403,736	+				-0.1
2,403,736	+				-2.1
2,403,738	+				-1.9
2,403,744	+				+0.5
2,403,746	-				-2.1
2,403,751	+				-2.4
2,403,751	+				-0.8
2,403,759	-				+0.9
2,403,759	-				-0.1
2,403,759	-				-0.9
2,403,759	-				-0.5
2,403,761	+				-0.7
2,403,779	-				+2.8
2,403,793	+				+2.9
2,403,795	-				-0.9
2,403,797	+				-1.6
2,403,799	+				-0.2
2,403,799	+				-1.1
2,403,799	+				+1.5
2,403,858	+				-1.6
2,403,875	+				+1.6
2,403,875	+				+0.1
2,403,875	+				+0.4
2,403,875	+				+1.6
2,403,875	+				-0.1
2,403,875	+				-0.4
2,403,875	+				-0.1
2,403,875	+				-0.1
2,403,880	+				-0.1
2,403,881	+				-3.1
2,403,883	-				-0.1
2,403,883	-				+1.4
2,403,883	-				+0.5
2,403,883	-				+0.9
2,403,883	-				-1.4
2,403,885	+				+2.1
2,403,886	+				-2.1
2,403,886	+				-1.2
2,403,886	+				+1.3
2,403,886	+				-0.1
2,403,886	+				-1.1
2,403,886	+				+1.9
2,403,886	+				-0.8
2,403,886	+				+0.5
2,403,886	+				+0.4
2,403,886	+				-0.5
2,403,886	+				-1.1
2,403,891	+				+2.1
2,403,893	-				+0.2
2,403,894	-				+0.4
2,403,896	+				+0.6
2,403,907	+				-2.3
2,403,912	+				-0.7
2,403,920	-		BWI76_RS11405	0.11	+0.6
2,403,920	-		BWI76_RS11405	0.11	-1.7
2,403,920	-		BWI76_RS11405	0.11	-0.8
2,403,942	-				-0.1
2,403,968	+		BWI76_RS11405	0.16	-1.1
2,404,084	-		BWI76_RS11405	0.29	+1.5
2,404,107	+		BWI76_RS11405	0.31	-0.5
2,404,228	-		BWI76_RS11405	0.44	-1.0
2,404,246	+		BWI76_RS11405	0.46	+0.3