Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09800

Experiment: KLEB29 MOI 1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS09795 and BWI76_RS09800 overlap by 4 nucleotidesBWI76_RS09800 and BWI76_RS09805 are separated by 46 nucleotides BWI76_RS09795: BWI76_RS09795 - lipid ABC transporter permease/ATP-binding protein, at 2,055,135 to 2,056,883 _RS09795 BWI76_RS09800: BWI76_RS09800 - tetraacyldisaccharide 4'-kinase, at 2,056,880 to 2,057,860 _RS09800 BWI76_RS09805: BWI76_RS09805 - hypothetical protein, at 2,057,907 to 2,059,136 _RS09805 Position (kb) 2056 2057 2058Strain fitness (log2 ratio) -1 0 1 2at 2057.888 kb on + strandat 2057.897 kb on + strandat 2057.913 kb on + strandat 2057.934 kb on - strandat 2058.070 kb on + strand, within BWI76_RS09805at 2058.108 kb on + strand, within BWI76_RS09805at 2058.116 kb on - strand, within BWI76_RS09805at 2058.116 kb on - strand, within BWI76_RS09805at 2058.235 kb on - strand, within BWI76_RS09805at 2058.853 kb on - strand, within BWI76_RS09805

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Per-strain Table

Position Strand Gene LocusTag Fraction KLEB29 MOI 1
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2,057,888 + +0.4
2,057,897 + +1.3
2,057,913 + -0.2
2,057,934 - -0.7
2,058,070 + BWI76_RS09805 0.13 +2.7
2,058,108 + BWI76_RS09805 0.16 +1.4
2,058,116 - BWI76_RS09805 0.17 +2.0
2,058,116 - BWI76_RS09805 0.17 +0.5
2,058,235 - BWI76_RS09805 0.27 +1.6
2,058,853 - BWI76_RS09805 0.77 +0.2

Or see this region's nucleotide sequence