Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09080
Experiment: KLEB29 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB29 MOI 1 |
---|---|---|---|---|---|
remove | |||||
1,916,103 | - | +0.4 | |||
1,916,122 | + | +1.7 | |||
1,916,137 | + | BWI76_RS09075 | 0.10 | -1.2 | |
1,916,137 | + | BWI76_RS09075 | 0.10 | -1.3 | |
1,916,137 | + | BWI76_RS09075 | 0.10 | +0.5 | |
1,916,137 | + | BWI76_RS09075 | 0.10 | -0.5 | |
1,916,137 | + | BWI76_RS09075 | 0.10 | -0.1 | |
1,916,137 | + | BWI76_RS09075 | 0.10 | +2.0 | |
1,916,145 | - | BWI76_RS09075 | 0.11 | -0.4 | |
1,916,145 | - | BWI76_RS09075 | 0.11 | +0.1 | |
1,916,145 | - | BWI76_RS09075 | 0.11 | -0.7 | |
1,916,209 | + | BWI76_RS09075 | 0.18 | -0.5 | |
1,916,218 | - | BWI76_RS09075 | 0.19 | +0.4 | |
1,916,337 | - | BWI76_RS09075 | 0.33 | +0.5 | |
1,916,713 | - | BWI76_RS09075 | 0.74 | -0.0 | |
1,917,117 | + | -0.4 | |||
1,917,343 | - | BWI76_RS09080 | 0.33 | +0.4 | |
1,917,670 | + | BWI76_RS09080 | 0.76 | -1.8 | |
1,917,818 | - | -0.1 | |||
1,917,838 | + | +1.0 | |||
1,917,865 | - | -0.8 | |||
1,918,082 | - | BWI76_RS09085 | 0.19 | -0.8 | |
1,918,231 | + | BWI76_RS09085 | 0.31 | -1.8 | |
1,918,347 | - | BWI76_RS09085 | 0.40 | +0.7 | |
1,918,418 | + | BWI76_RS09085 | 0.46 | -0.3 | |
1,918,435 | + | BWI76_RS09085 | 0.47 | +0.2 | |
1,918,585 | - | BWI76_RS09085 | 0.59 | -0.4 | |
1,918,846 | + | BWI76_RS09085 | 0.81 | +1.2 |
Or see this region's nucleotide sequence