Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08595
Experiment: KLEB29 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB29 MOI 1 |
---|---|---|---|---|---|
remove | |||||
1,812,441 | - | BWI76_RS08590 | 0.33 | -1.1 | |
1,812,443 | - | BWI76_RS08590 | 0.33 | +0.5 | |
1,812,462 | - | BWI76_RS08590 | 0.35 | +0.1 | |
1,812,488 | - | BWI76_RS08590 | 0.38 | +1.1 | |
1,812,512 | + | BWI76_RS08590 | 0.40 | -1.4 | |
1,812,678 | - | BWI76_RS08590 | 0.58 | -0.7 | |
1,812,988 | - | +3.6 | |||
1,813,082 | + | +1.2 | |||
1,813,168 | - | -0.1 | |||
1,813,170 | + | +3.0 | |||
1,813,178 | - | +0.6 | |||
1,813,208 | - | -0.4 | |||
1,813,326 | - | BWI76_RS08595 | 0.35 | +0.6 | |
1,813,337 | + | BWI76_RS08595 | 0.38 | +0.4 | |
1,813,395 | - | BWI76_RS08595 | 0.54 | +0.2 | |
1,813,422 | + | BWI76_RS08595 | 0.61 | +1.5 | |
1,813,454 | + | BWI76_RS08595 | 0.70 | +1.0 | |
1,813,518 | + | BWI76_RS08595 | 0.87 | +1.6 | |
1,813,524 | + | BWI76_RS08595 | 0.88 | +0.2 | |
1,813,634 | - | +0.0 | |||
1,813,641 | + | -0.4 | |||
1,813,641 | + | +0.3 | |||
1,813,721 | - | +2.2 | |||
1,814,066 | - | BWI76_RS08600 | 0.17 | +4.2 | |
1,814,104 | + | BWI76_RS08600 | 0.21 | +1.8 | |
1,814,266 | - | BWI76_RS08600 | 0.36 | +0.5 |
Or see this region's nucleotide sequence