Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08460

Experiment: KLEB29 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB29 MOI 1
1,790,600	+		BWI76_RS08455	0.50	-0.1
1,790,609	-		BWI76_RS08455	0.51	-0.0
1,790,811	+		BWI76_RS08455	0.71	+0.1
1,790,930	-		BWI76_RS08455	0.83	-0.1
1,790,942	+		BWI76_RS08455	0.84	+2.1
1,791,044	+				+0.5
1,791,141	-				+0.7
1,791,150	-				+1.1
1,791,208	+				+0.9
1,791,514	+		BWI76_RS08460	0.26	+0.6
1,791,572	+		BWI76_RS08460	0.30	+0.4
1,791,572	+		BWI76_RS08460	0.30	+1.0
1,791,580	-		BWI76_RS08460	0.31	-0.9
1,791,730	-				+3.7
1,791,947	+		BWI76_RS08460	0.59	-0.1
1,791,947	+		BWI76_RS08460	0.59	+0.3
1,791,959	+		BWI76_RS08460	0.60	+0.3
1,792,049	+		BWI76_RS08460	0.67	-0.2
1,792,077	+		BWI76_RS08460	0.69	-0.7
1,792,099	-		BWI76_RS08460	0.71	+2.3
1,792,100	+		BWI76_RS08460	0.71	+0.1
1,792,104	+				+0.9
1,792,144	+		BWI76_RS08460	0.74	-0.3
1,792,144	+		BWI76_RS08460	0.74	+0.7
1,792,152	-		BWI76_RS08460	0.75	-0.5
1,792,154	-		BWI76_RS08460	0.75	+0.1
1,792,157	+		BWI76_RS08460	0.75	-0.7
1,792,157	+		BWI76_RS08460	0.75	+1.6
1,792,157	+		BWI76_RS08460	0.75	+1.0
1,792,162	+		BWI76_RS08460	0.76	+0.4
1,792,162	+		BWI76_RS08460	0.76	-1.7
1,792,162	+		BWI76_RS08460	0.76	+0.9
1,792,162	+		BWI76_RS08460	0.76	-0.7
1,792,165	-		BWI76_RS08460	0.76	+0.4
1,792,165	-				-0.7
1,792,170	-		BWI76_RS08460	0.76	+3.2
1,792,177	+		BWI76_RS08460	0.77	+0.3
1,792,178	+		BWI76_RS08460	0.77	+2.6
1,792,180	-		BWI76_RS08460	0.77	+0.6
1,792,185	-		BWI76_RS08460	0.77	+0.7
1,792,185	-				+2.5
1,792,187	+		BWI76_RS08460	0.77	-1.7
1,792,188	+		BWI76_RS08460	0.78	+0.5
1,792,189	-		BWI76_RS08460	0.78	+0.9
1,792,193	+		BWI76_RS08460	0.78	-0.4
1,792,196	-		BWI76_RS08460	0.78	+0.6
1,792,196	-		BWI76_RS08460	0.78	-0.0
1,792,208	-		BWI76_RS08460	0.79	+1.5
1,792,275	-		BWI76_RS08460	0.84	-1.9
1,792,285	+		BWI76_RS08460	0.85	-0.4
1,792,293	-		BWI76_RS08460	0.86	-1.0
1,792,295	+		BWI76_RS08460	0.86	+1.5
1,792,295	+		BWI76_RS08460	0.86	-0.4
1,792,303	-		BWI76_RS08460	0.86	-1.4
1,792,308	-		BWI76_RS08460	0.87	-1.7
1,792,360	+				+0.6
1,792,360	+				+0.0
1,792,360	+				+1.0
1,792,360	+				-1.1
1,792,360	+				+1.7
1,792,360	+				+0.1
1,792,360	+				+0.1
1,792,360	+				+1.2
1,792,368	-				-2.7
1,792,368	-				+0.3
1,792,368	-				+1.1
1,792,368	-				+0.9
1,792,368	-				+0.4
1,792,368	-				-0.7
1,792,393	+				+0.4
1,792,401	-				-2.4
1,792,442	+				+0.2
1,792,444	-				-1.9
1,792,494	+				+2.9
1,792,495	+				+1.1
1,792,495	+				-0.7
1,792,495	+				-0.6
1,792,495	+				+0.6
1,792,495	+				-0.1
1,792,495	+				-0.5
1,792,495	+				+0.6
1,792,495	+				+0.8
1,792,495	+				+1.5
1,792,495	+				+1.5
1,792,495	+				+1.1
1,792,495	+				-0.6
1,792,495	+				+0.5
1,792,495	+				-0.2
1,792,495	+				-2.1
1,792,498	+				+0.9
1,792,498	-				+0.5
1,792,498	-				+0.1
1,792,500	+				+0.9
1,792,500	+				-0.3
1,792,500	+				+0.5
1,792,500	+				-0.4
1,792,500	+				+0.7
1,792,500	+				-0.1
1,792,500	+				-0.1
1,792,500	+				+0.3
1,792,500	+				-0.3
1,792,500	+				-2.3
1,792,500	+				+2.2
1,792,503	-				-0.1
1,792,503	-				-3.1
1,792,503	-				+2.9
1,792,503	-				+1.2
1,792,503	-				-0.3
1,792,503	-				+1.6
1,792,503	-				+0.6
1,792,503	-				-0.2
1,792,503	-				-1.4
1,792,503	-				+1.4
1,792,503	-				-1.4
1,792,503	-				-0.2
1,792,503	-				+0.7
1,792,503	-				+0.4
1,792,503	-				+1.6
1,792,503	-				-0.5
1,792,503	-				+0.5
1,792,503	-				+1.9
1,792,503	-				+0.7
1,792,503	-				+1.7
1,792,505	+				-1.9
1,792,508	+				-2.1
1,792,508	-				-0.2
1,792,508	-				+0.4
1,792,508	-				+0.7
1,792,508	-				+0.4
1,792,508	-				-0.4
1,792,508	-				-1.4
1,792,508	-				+0.5
1,792,508	-				-0.1
1,792,508	-				-0.1
1,792,508	-				-0.2
1,792,508	-				+0.1
1,792,508	-				+1.9
1,792,508	-				+3.0
1,792,513	+				+0.6
1,792,517	+				+0.7
1,792,517	+				-1.1
1,792,517	+				+0.2
1,792,517	+				-0.0
1,792,517	+				+0.5
1,792,517	+				-2.7
1,792,517	+				-1.8
1,792,517	+				-1.3
1,792,517	+				+0.7
1,792,517	+				-1.3
1,792,517	+				+1.1
1,792,518	+				+0.9
1,792,518	+				+1.1
1,792,518	+				-0.4
1,792,518	+				+2.6
1,792,518	+				-1.4
1,792,518	+				-1.7
1,792,518	+				-0.7
1,792,518	+				-2.7
1,792,518	+				+1.5
1,792,518	+				+0.1
1,792,518	+				-1.9
1,792,518	+				+1.6
1,792,518	+				+0.9
1,792,518	+				+0.0
1,792,518	+				+0.8
1,792,518	+				-1.6
1,792,518	+				+3.1
1,792,518	+				+0.6
1,792,518	+				-0.9
1,792,518	+				-0.1
1,792,518	+				+0.1
1,792,518	+				-1.6
1,792,518	+				-0.3
1,792,518	+				+0.2
1,792,518	+				-1.3
1,792,518	+				-0.5
1,792,518	+				+0.9
1,792,518	+				+0.4
1,792,518	+				-0.3
1,792,518	+				+1.3
1,792,518	+				-0.6
1,792,518	+				+0.1
1,792,518	+				+1.3
1,792,518	+				-0.8
1,792,518	+				-0.7
1,792,518	+				-0.3
1,792,518	+				-0.4
1,792,518	+				+0.8
1,792,518	+				+1.2
1,792,518	+				-0.1
1,792,518	+				-0.2
1,792,518	+				+1.1
1,792,518	+				-0.3
1,792,518	+				+1.1
1,792,518	+				+0.7
1,792,518	-				+0.7
1,792,520	+				-0.1
1,792,520	+				+0.4
1,792,523	-				-0.1
1,792,523	-				+0.1
1,792,523	-				-1.9
1,792,523	-				-0.4
1,792,525	-				-0.8
1,792,525	-				-0.5
1,792,525	-				+0.4
1,792,525	-				+0.2
1,792,525	-				-0.1
1,792,525	-				-0.6
1,792,525	-				+1.7
1,792,525	-				+1.0
1,792,525	-				-1.7
1,792,525	-				+1.6
1,792,525	-				+0.9
1,792,525	-				+0.8
1,792,525	-				+1.0
1,792,525	-				-0.3
1,792,525	-				+0.4
1,792,525	-				+0.8
1,792,525	-				-0.8
1,792,525	-				+0.7
1,792,525	-				+0.8
1,792,525	-				+0.2
1,792,525	-				+0.8
1,792,526	-				+0.4
1,792,526	-				-0.2
1,792,526	-				+0.1
1,792,526	-				+0.2
1,792,526	-				-1.1
1,792,526	-				-1.3
1,792,526	-				-0.4
1,792,526	-				-0.2
1,792,526	-				+0.8
1,792,526	-				+0.3
1,792,526	-				-1.4
1,792,526	-				+0.8
1,792,526	-				+0.9
1,792,526	-				+1.1
1,792,526	-				+1.0
1,792,526	-				-0.7
1,792,526	-				-0.3
1,792,526	-				-3.4
1,792,526	-				+1.7
1,792,526	-				-1.3
1,792,526	-				-0.7
1,792,526	-				+1.3
1,792,526	-				+0.4
1,792,526	-				-0.9
1,792,526	-				+0.4
1,792,526	-				+0.2
1,792,526	-				+1.7
1,792,526	-				-1.1
1,792,526	-				+1.1
1,792,526	-				+0.6
1,792,526	-				+2.0
1,792,526	-				+1.5
1,792,526	-				-0.8
1,792,526	-				+2.5
1,792,526	-				+1.5
1,792,526	-				+1.3
1,792,526	-				+1.1
1,792,526	-				-0.6
1,792,526	-				+1.5
1,792,526	-				+0.5
1,792,526	-				+0.0
1,792,526	-				-1.5
1,792,526	-				+1.3
1,792,526	-				+0.6
1,792,528	+				+0.4
1,792,528	+				+1.2
1,792,528	+				+0.5
1,792,528	+				-0.9
1,792,528	+				-2.3
1,792,528	+				+2.9
1,792,528	+				-0.9
1,792,528	+				-1.1
1,792,528	+				+1.5
1,792,528	+				+1.4
1,792,528	+				+1.4
1,792,528	+				+2.1
1,792,528	+				-1.1
1,792,528	+				+2.5
1,792,528	+				-0.5
1,792,528	+				+0.1
1,792,528	+				+0.3
1,792,528	+				+0.7
1,792,528	+				+1.2
1,792,528	+				+0.5
1,792,528	+				+0.1
1,792,528	+				-0.7
1,792,528	+				-0.4
1,792,528	+				+0.3
1,792,528	+				+1.0
1,792,528	+				+0.6
1,792,528	+				+0.6
1,792,528	+				+1.2
1,792,528	+				+0.7
1,792,528	+				+0.7
1,792,528	+				-1.3
1,792,528	+				-1.4
1,792,528	+				+0.3
1,792,528	+				+1.4
1,792,528	+				+0.4
1,792,528	+				-0.1
1,792,528	+				+0.5
1,792,528	+				+0.8
1,792,528	+				-0.1
1,792,528	+				-0.4
1,792,528	+				+2.7
1,792,528	+				+0.1
1,792,528	+				+0.0
1,792,528	+				+0.6
1,792,531	-				-0.9
1,792,531	-				-0.5
1,792,536	-				-0.5
1,792,536	-				-2.6
1,792,536	-				-2.9
1,792,536	-				+0.9
1,792,536	-				+1.9
1,792,536	-				-0.9
1,792,536	-				+1.3
1,792,536	-				+1.2
1,792,536	-				+1.0
1,792,536	-				-0.1
1,792,536	-				+0.2
1,792,536	-				+0.1
1,792,536	-				+0.3
1,792,536	-				+1.6
1,792,536	-				+0.3
1,792,536	-				+0.7
1,792,536	-				+0.4
1,792,536	-				+0.4
1,792,536	-				-0.1
1,792,536	-				+0.8
1,792,536	-				+0.5
1,792,536	-				+0.1
1,792,536	-				+1.0
1,792,536	-				+0.4
1,792,536	-				-1.7
1,792,536	-				+1.0
1,792,536	-				-1.0
1,792,536	-				-0.6
1,792,536	-				+1.0
1,792,536	-				+0.1
1,792,536	-				-0.4
1,792,536	-				-1.3
1,792,536	-				-0.1
1,792,536	-				+0.9
1,792,536	-				-1.9
1,792,536	-				-0.0
1,792,536	-				+0.5
1,792,536	-				-0.6
1,792,536	-				+0.6
1,792,541	+				+1.3
1,792,541	+				-1.7
1,792,541	+				+0.9
1,792,541	+				+0.2
1,792,541	+				+0.7
1,792,549	-				-0.3
1,792,549	-				+0.8
1,792,549	-				+0.6
1,792,551	+				-0.7
1,792,551	+				+1.6
1,792,551	+				-0.1
1,792,551	+				+0.7
1,792,551	+				+1.0
1,792,551	+				-1.9
1,792,551	+				+0.9
1,792,551	+				-1.4
1,792,551	+				-1.4
1,792,551	+				+0.3
1,792,551	+				+1.3
1,792,551	+				-0.7
1,792,551	+				-0.6
1,792,551	+				-0.7
1,792,551	-				+0.5
1,792,557	+				-1.4
1,792,559	-				+1.8
1,792,559	-				+0.4
1,792,559	-				+1.1
1,792,559	-				+0.9
1,792,559	-				-0.8
1,792,559	-				+0.6
1,792,559	-				-0.5
1,792,559	-				+0.4
1,792,559	-				-2.9
1,792,559	-				-1.8
1,792,559	-				-0.9
1,792,559	-				-0.4
1,792,559	-				-3.1
1,792,559	-				+1.1
1,792,559	-				-0.9
1,792,559	-				-0.6
1,792,559	-				+0.1
1,792,559	-				+0.5
1,792,559	-				-0.3
1,792,559	-				-2.7
1,792,559	-				-0.3
1,792,559	-				+0.4
1,792,559	-				+0.3
1,792,559	-				-1.9
1,792,559	-				+0.4
1,792,559	-				-0.1
1,792,559	-				+0.9
1,792,559	-				+0.9
1,792,559	-				+0.3
1,792,559	-				+1.8
1,792,559	-				+1.4
1,792,559	-				+2.7
1,792,562	+				+0.3
1,792,562	+				+0.3
1,792,562	+				-0.4
1,792,562	+				+1.9
1,792,562	+				+0.9
1,792,564	-				+1.1
1,792,570	-				-0.2
1,792,570	-				+0.5
1,792,570	-				+0.3
1,792,570	-				+3.7
1,792,578	+				+0.9
1,792,586	+				+0.9
1,792,593	+				-1.9
1,792,593	+				+0.7
1,792,599	+				+1.0
1,792,599	+				+1.9
1,792,599	+				-3.6
1,792,602	-				+1.5
1,792,607	-				+3.5
1,792,607	-				-0.5
1,792,607	-				-0.4
1,792,607	-				+0.7
1,792,607	-				+0.3
1,792,607	-				-1.4
1,792,607	-				+2.2
1,792,607	-				-0.7
1,792,607	-				+1.5
1,792,609	+				-0.7
1,792,609	+				+0.1
1,792,617	-				+1.3
1,792,624	-				+0.3
1,792,624	-				-0.2
1,792,624	-				+0.3
1,792,656	+				+1.1
1,792,689	+		BWI76_RS08465	0.12	-0.9
1,792,689	+		BWI76_RS08465	0.12	-0.1
1,792,695	-		BWI76_RS08465	0.14	+1.4
1,792,695	-		BWI76_RS08465	0.14	+0.0
1,792,697	+		BWI76_RS08465	0.14	-2.6
1,792,697	-		BWI76_RS08465	0.14	+1.0
1,792,697	-		BWI76_RS08465	0.14	+1.8
1,792,703	+		BWI76_RS08465	0.16	+1.9
1,792,705	-		BWI76_RS08465	0.17	-0.7
1,792,712	+		BWI76_RS08465	0.19	-1.8
1,792,768	-		BWI76_RS08465	0.37	+0.2
1,792,773	-		BWI76_RS08465	0.38	-1.1
1,792,773	-		BWI76_RS08465	0.38	+0.6
1,792,773	-		BWI76_RS08465	0.38	-1.0
1,792,823	+		BWI76_RS08465	0.54	-1.4
1,792,828	+		BWI76_RS08465	0.56	+0.5
1,792,838	+		BWI76_RS08465	0.59	+1.6
1,792,838	+		BWI76_RS08465	0.59	+0.5
1,792,846	-		BWI76_RS08465	0.61	+0.1
1,792,853	+		BWI76_RS08465	0.64	-0.2
1,792,853	+		BWI76_RS08465	0.64	-1.4
1,792,853	-		BWI76_RS08465	0.64	+0.9
1,792,853	-		BWI76_RS08465	0.64	+1.2
1,792,861	-		BWI76_RS08465	0.66	+0.7
1,792,861	-		BWI76_RS08465	0.66	+0.2
1,792,914	+		BWI76_RS08465	0.83	-0.1
1,792,933	+		BWI76_RS08465	0.89	+0.8
1,792,933	+		BWI76_RS08465	0.89	+1.8
1,792,933	+		BWI76_RS08465	0.89	+0.9
1,792,951	+				+0.7
1,792,959	-				+0.8
1,792,970	+				-0.1
1,792,976	-				+1.9
1,792,976	-				-1.6
1,792,984	+				-1.6
1,792,984	+				+1.8
1,793,055	+				+0.5
1,793,055	+				-4.4
1,793,063	-				-0.5
1,793,063	-				+0.9
1,793,109	-		BWI76_RS08470	0.11	-0.4
1,793,153	-		BWI76_RS08470	0.14	+0.3
1,793,155	-		BWI76_RS08470	0.14	+0.5
1,793,158	-		BWI76_RS08470	0.14	-0.4
1,793,158	-		BWI76_RS08470	0.14	+2.3
1,793,162	+		BWI76_RS08470	0.14	-0.0
1,793,293	-		BWI76_RS08470	0.24	-0.1
1,793,340	+		BWI76_RS08470	0.27	+0.2