Experiment: KLEB29 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24645 and BWI76_RS24650 are separated by 1 nucleotides BWI76_RS24650 and BWI76_RS24655 are separated by 0 nucleotides
BWI76_RS24645: BWI76_RS24645 - autoinducer 2 ABC transporter substrate-binding protein, at 5,135,999 to 5,137,000
_RS24645
BWI76_RS24650: BWI76_RS24650 - putative transport system permease component, at 5,137,002 to 5,137,994
_RS24650
BWI76_RS24655: BWI76_RS24655 - autoinducer 2 ABC transporter permease LsrC, at 5,137,995 to 5,139,029
_RS24655
Position (kb) 5137
5138 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5136.097 kb on - strand at 5136.101 kb on + strand, within BWI76_RS24645 at 5136.258 kb on + strand, within BWI76_RS24645 at 5136.266 kb on - strand, within BWI76_RS24645 at 5136.266 kb on - strand, within BWI76_RS24645 at 5136.569 kb on + strand, within BWI76_RS24645 at 5136.680 kb on + strand, within BWI76_RS24645 at 5136.713 kb on + strand, within BWI76_RS24645 at 5136.805 kb on + strand, within BWI76_RS24645 at 5136.828 kb on - strand, within BWI76_RS24645 at 5136.844 kb on + strand, within BWI76_RS24645 at 5136.844 kb on + strand, within BWI76_RS24645 at 5136.957 kb on + strand at 5137.044 kb on + strand at 5137.105 kb on + strand, within BWI76_RS24650 at 5137.371 kb on - strand, within BWI76_RS24650 at 5137.549 kb on - strand, within BWI76_RS24650 at 5137.585 kb on + strand, within BWI76_RS24650 at 5137.687 kb on + strand, within BWI76_RS24650 at 5137.970 kb on - strand at 5137.970 kb on - strand at 5138.211 kb on - strand, within BWI76_RS24655 at 5138.512 kb on - strand, within BWI76_RS24655 at 5138.512 kb on - strand, within BWI76_RS24655 at 5138.593 kb on - strand, within BWI76_RS24655 at 5138.593 kb on - strand, within BWI76_RS24655 at 5138.634 kb on - strand, within BWI76_RS24655 at 5138.662 kb on - strand, within BWI76_RS24655 at 5138.771 kb on + strand, within BWI76_RS24655
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB29 MOI 1 remove 5,136,097 - +0.9 5,136,101 + BWI76_RS24645 0.10 -0.0 5,136,258 + BWI76_RS24645 0.26 -2.0 5,136,266 - BWI76_RS24645 0.27 -2.0 5,136,266 - BWI76_RS24645 0.27 -1.3 5,136,569 + BWI76_RS24645 0.57 +0.3 5,136,680 + BWI76_RS24645 0.68 -3.0 5,136,713 + BWI76_RS24645 0.71 -1.0 5,136,805 + BWI76_RS24645 0.80 +0.2 5,136,828 - BWI76_RS24645 0.83 -2.9 5,136,844 + BWI76_RS24645 0.84 +0.4 5,136,844 + BWI76_RS24645 0.84 +0.3 5,136,957 + -1.9 5,137,044 + -0.8 5,137,105 + BWI76_RS24650 0.10 -1.9 5,137,371 - BWI76_RS24650 0.37 -0.5 5,137,549 - BWI76_RS24650 0.55 -3.1 5,137,585 + BWI76_RS24650 0.59 -1.4 5,137,687 + BWI76_RS24650 0.69 -0.7 5,137,970 - -0.2 5,137,970 - -0.7 5,138,211 - BWI76_RS24655 0.21 -0.6 5,138,512 - BWI76_RS24655 0.50 -0.2 5,138,512 - BWI76_RS24655 0.50 +1.6 5,138,593 - BWI76_RS24655 0.58 -0.7 5,138,593 - BWI76_RS24655 0.58 -0.4 5,138,634 - BWI76_RS24655 0.62 +0.1 5,138,662 - BWI76_RS24655 0.64 +0.9 5,138,771 + BWI76_RS24655 0.75 +0.3
Or see this region's nucleotide sequence