Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19440
Experiment: KLEB29 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB29 MOI 1 |
---|---|---|---|---|---|
remove | |||||
4,060,153 | - | BWI76_RS19435 | 0.75 | -0.7 | |
4,060,291 | + | BWI76_RS19435 | 0.79 | -1.5 | |
4,060,326 | - | BWI76_RS19435 | 0.80 | +0.0 | |
4,060,521 | + | BWI76_RS19435 | 0.86 | -1.4 | |
4,061,256 | - | BWI76_RS19440 | 0.13 | -0.4 | |
4,061,405 | - | BWI76_RS19440 | 0.27 | -0.4 | |
4,061,551 | - | BWI76_RS19440 | 0.40 | -0.4 | |
4,061,682 | + | BWI76_RS19440 | 0.52 | -1.4 | |
4,061,860 | + | BWI76_RS19440 | 0.68 | -1.2 | |
4,062,257 | - | +0.0 | |||
4,062,261 | - | -1.3 | |||
4,062,261 | - | -0.6 | |||
4,062,263 | + | -0.7 | |||
4,062,383 | - | -2.8 | |||
4,062,497 | - | BWI76_RS19445 | 0.12 | -0.9 | |
4,062,525 | + | BWI76_RS19445 | 0.14 | +1.4 | |
4,062,582 | + | BWI76_RS19445 | 0.16 | -0.3 | |
4,062,601 | - | BWI76_RS19445 | 0.17 | +0.9 | |
4,062,732 | - | BWI76_RS19445 | 0.23 | -0.3 | |
4,062,999 | + | BWI76_RS19445 | 0.34 | -1.6 | |
4,063,156 | - | BWI76_RS19445 | 0.41 | -0.7 |
Or see this region's nucleotide sequence