Experiment: KLEB29 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14515 and BWI76_RS14520 overlap by 14 nucleotides BWI76_RS14520 and BWI76_RS14525 are separated by 165 nucleotides
BWI76_RS14515: BWI76_RS14515 - yersiniabactin-iron ABC transporter permease ATP-binding protein YbtQ, at 3,031,119 to 3,032,921
_RS14515
BWI76_RS14520: BWI76_RS14520 - hypothetical protein, at 3,032,908 to 3,034,710
_RS14520
BWI76_RS14525: BWI76_RS14525 - AraC family transcriptional regulator, at 3,034,876 to 3,035,835
_RS14525
Position (kb)
3032
3033
3034
3035 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3032.035 kb on + strand, within BWI76_RS14515 at 3032.187 kb on + strand, within BWI76_RS14515 at 3032.386 kb on + strand, within BWI76_RS14515 at 3032.660 kb on + strand, within BWI76_RS14515 at 3032.668 kb on - strand, within BWI76_RS14515 at 3032.713 kb on + strand, within BWI76_RS14515 at 3032.836 kb on + strand at 3032.906 kb on + strand at 3032.938 kb on - strand at 3033.117 kb on - strand, within BWI76_RS14520 at 3033.497 kb on - strand, within BWI76_RS14520 at 3034.100 kb on + strand, within BWI76_RS14520 at 3034.181 kb on - strand, within BWI76_RS14520 at 3034.362 kb on + strand, within BWI76_RS14520 at 3034.391 kb on - strand, within BWI76_RS14520 at 3034.451 kb on + strand, within BWI76_RS14520 at 3034.481 kb on - strand, within BWI76_RS14520 at 3034.539 kb on - strand at 3034.541 kb on - strand at 3034.832 kb on + strand at 3034.845 kb on - strand at 3034.847 kb on + strand at 3034.996 kb on + strand, within BWI76_RS14525 at 3035.061 kb on + strand, within BWI76_RS14525 at 3035.205 kb on - strand, within BWI76_RS14525 at 3035.230 kb on - strand, within BWI76_RS14525 at 3035.456 kb on + strand, within BWI76_RS14525
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB29 MOI 1 remove 3,032,035 + BWI76_RS14515 0.51 -3.0 3,032,187 + BWI76_RS14515 0.59 -2.3 3,032,386 + BWI76_RS14515 0.70 +0.4 3,032,660 + BWI76_RS14515 0.85 -0.9 3,032,668 - BWI76_RS14515 0.86 +0.2 3,032,713 + BWI76_RS14515 0.88 +1.3 3,032,836 + +0.4 3,032,906 + +1.1 3,032,938 - -3.0 3,033,117 - BWI76_RS14520 0.12 +0.0 3,033,497 - BWI76_RS14520 0.33 -0.6 3,034,100 + BWI76_RS14520 0.66 -0.4 3,034,181 - BWI76_RS14520 0.71 -3.1 3,034,362 + BWI76_RS14520 0.81 -1.1 3,034,391 - BWI76_RS14520 0.82 -1.5 3,034,451 + BWI76_RS14520 0.86 -0.7 3,034,481 - BWI76_RS14520 0.87 +1.1 3,034,539 - +0.7 3,034,541 - +1.4 3,034,832 + +1.8 3,034,845 - -1.1 3,034,847 + -0.0 3,034,996 + BWI76_RS14525 0.12 -0.1 3,035,061 + BWI76_RS14525 0.19 -1.9 3,035,205 - BWI76_RS14525 0.34 +1.5 3,035,230 - BWI76_RS14525 0.37 +0.6 3,035,456 + BWI76_RS14525 0.60 +2.8
Or see this region's nucleotide sequence