Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12960
Experiment: KLEB29 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB29 MOI 1 |
---|---|---|---|---|---|
remove | |||||
2,701,122 | + | BWI76_RS12955 | 0.72 | -2.2 | |
2,701,268 | - | BWI76_RS12955 | 0.77 | +0.7 | |
2,701,638 | - | BWI76_RS12955 | 0.89 | -1.2 | |
2,701,645 | + | BWI76_RS12955 | 0.89 | +0.5 | |
2,701,853 | - | +1.0 | |||
2,701,935 | + | -0.5 | |||
2,702,072 | + | +0.1 | |||
2,702,080 | - | -0.5 | |||
2,702,497 | + | -0.9 | |||
2,702,575 | + | -0.4 | |||
2,702,583 | + | +1.5 | |||
2,702,583 | + | +3.7 | |||
2,702,590 | + | +0.0 | |||
2,702,591 | - | +0.2 | |||
2,702,779 | + | -0.9 | |||
2,702,779 | + | -0.9 | |||
2,703,053 | - | BWI76_RS12965 | 0.31 | -0.5 | |
2,703,123 | + | BWI76_RS12965 | 0.39 | -0.5 | |
2,703,151 | + | BWI76_RS12965 | 0.43 | -1.4 | |
2,703,169 | + | BWI76_RS12965 | 0.45 | -2.0 | |
2,703,194 | - | BWI76_RS12965 | 0.47 | -0.2 | |
2,703,338 | - | BWI76_RS12965 | 0.64 | -0.1 | |
2,703,491 | - | BWI76_RS12965 | 0.82 | -0.9 |
Or see this region's nucleotide sequence