Experiment: KLEB29 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07445 and BWI76_RS07450 are separated by 109 nucleotides BWI76_RS07450 and BWI76_RS07455 are separated by 265 nucleotides
BWI76_RS07445: BWI76_RS07445 - MFS transporter, at 1,571,121 to 1,572,548
_RS07445
BWI76_RS07450: BWI76_RS07450 - transcriptional regulator, at 1,572,658 to 1,573,524
_RS07450
BWI76_RS07455: BWI76_RS07455 - NAD(P)H nitroreductase, at 1,573,790 to 1,574,443
_RS07455
Position (kb)
1572
1573
1574 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1571.873 kb on + strand, within BWI76_RS07445 at 1571.924 kb on + strand, within BWI76_RS07445 at 1571.932 kb on - strand, within BWI76_RS07445 at 1571.984 kb on + strand, within BWI76_RS07445 at 1572.283 kb on - strand, within BWI76_RS07445 at 1572.494 kb on - strand at 1572.507 kb on + strand at 1572.571 kb on - strand at 1572.924 kb on + strand, within BWI76_RS07450 at 1573.171 kb on - strand, within BWI76_RS07450 at 1573.321 kb on + strand, within BWI76_RS07450 at 1573.332 kb on - strand, within BWI76_RS07450 at 1573.344 kb on + strand, within BWI76_RS07450 at 1573.430 kb on - strand, within BWI76_RS07450 at 1573.704 kb on + strand at 1573.705 kb on - strand at 1573.714 kb on + strand at 1573.827 kb on + strand at 1573.882 kb on + strand, within BWI76_RS07455 at 1573.901 kb on - strand, within BWI76_RS07455 at 1573.906 kb on - strand, within BWI76_RS07455 at 1574.160 kb on + strand, within BWI76_RS07455 at 1574.165 kb on + strand, within BWI76_RS07455 at 1574.465 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB29 MOI 1 remove 1,571,873 + BWI76_RS07445 0.53 -0.1 1,571,924 + BWI76_RS07445 0.56 +0.1 1,571,932 - BWI76_RS07445 0.57 -0.7 1,571,984 + BWI76_RS07445 0.60 -0.7 1,572,283 - BWI76_RS07445 0.81 -0.1 1,572,494 - -0.5 1,572,507 + -0.7 1,572,571 - -1.4 1,572,924 + BWI76_RS07450 0.31 -0.8 1,573,171 - BWI76_RS07450 0.59 -0.0 1,573,321 + BWI76_RS07450 0.76 -0.9 1,573,332 - BWI76_RS07450 0.78 -1.2 1,573,344 + BWI76_RS07450 0.79 -2.0 1,573,430 - BWI76_RS07450 0.89 -0.8 1,573,704 + -0.7 1,573,705 - -0.9 1,573,714 + +0.7 1,573,827 + +0.4 1,573,882 + BWI76_RS07455 0.14 -0.1 1,573,901 - BWI76_RS07455 0.17 -1.6 1,573,906 - BWI76_RS07455 0.18 -2.9 1,574,160 + BWI76_RS07455 0.57 -1.3 1,574,165 + BWI76_RS07455 0.57 +0.1 1,574,465 - -0.1
Or see this region's nucleotide sequence