Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05905

Experiment: KLEB29 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB29 MOI 1
1,239,810	+				+0.1
1,239,908	+		BWI76_RS05900	0.13	-0.7
1,239,974	-		BWI76_RS05900	0.20	-0.1
1,240,080	+		BWI76_RS05900	0.33	-0.7
1,240,162	+		BWI76_RS05900	0.42	-1.3
1,240,225	+		BWI76_RS05900	0.49	-1.1
1,240,267	+		BWI76_RS05900	0.54	-0.7
1,240,336	+		BWI76_RS05900	0.62	-2.1
1,240,679	+				-1.0
1,240,735	+				-1.3
1,240,745	+				-1.2
1,240,931	-		BWI76_RS05905	0.20	+0.1
1,240,975	+		BWI76_RS05905	0.25	-0.4
1,241,057	+		BWI76_RS05905	0.34	-0.1
1,241,065	-		BWI76_RS05905	0.35	-0.2
1,241,084	+		BWI76_RS05905	0.37	-2.8
1,241,096	+		BWI76_RS05905	0.38	-0.7
1,241,104	-		BWI76_RS05905	0.39	-0.1
1,241,138	+		BWI76_RS05905	0.42	-0.8
1,241,184	-		BWI76_RS05905	0.47	+0.1
1,241,192	-		BWI76_RS05905	0.48	-1.6
1,241,192	-		BWI76_RS05905	0.48	-0.1
1,241,192	-		BWI76_RS05905	0.48	-2.9
1,241,219	+		BWI76_RS05905	0.51	-0.2
1,241,223	+		BWI76_RS05905	0.51	-0.4
1,241,226	-		BWI76_RS05905	0.52	+0.1
1,241,239	+		BWI76_RS05905	0.53	+0.9
1,241,239	+		BWI76_RS05905	0.53	-2.0
1,241,239	+		BWI76_RS05905	0.53	-1.3
1,241,239	+		BWI76_RS05905	0.53	-1.0
1,241,239	+		BWI76_RS05905	0.53	-2.0
1,241,247	-		BWI76_RS05905	0.54	+2.7
1,241,289	-		BWI76_RS05905	0.58	+1.3
1,241,315	+		BWI76_RS05905	0.61	-0.9
1,241,315	+		BWI76_RS05905	0.61	-1.6
1,241,315	+		BWI76_RS05905	0.61	-1.9
1,241,323	-		BWI76_RS05905	0.62	-0.4
1,241,325	+		BWI76_RS05905	0.62	+1.0
1,241,325	+		BWI76_RS05905	0.62	-0.5
1,241,333	-		BWI76_RS05905	0.63	-0.3
1,241,342	-		BWI76_RS05905	0.64	-1.0
1,241,363	+		BWI76_RS05905	0.66	+0.2
1,241,382	+		BWI76_RS05905	0.68	+0.0
1,241,410	+		BWI76_RS05905	0.71	-0.5
1,241,435	-		BWI76_RS05905	0.74	+0.4
1,241,471	+		BWI76_RS05905	0.78	-0.8
1,241,481	+		BWI76_RS05905	0.79	-2.3
1,241,499	+		BWI76_RS05905	0.81	-0.5
1,241,500	-		BWI76_RS05905	0.81	-0.2
1,241,505	-		BWI76_RS05905	0.81	-2.2
1,241,517	+		BWI76_RS05905	0.83	-2.0
1,241,517	+		BWI76_RS05905	0.83	-0.7
1,241,523	-		BWI76_RS05905	0.83	-3.4
1,241,537	+		BWI76_RS05905	0.85	-0.3
1,241,537	-		BWI76_RS05905	0.85	-1.2
1,241,538	-		BWI76_RS05905	0.85	-1.1
1,241,545	-		BWI76_RS05905	0.86	+0.5
1,241,557	-		BWI76_RS05905	0.87	+1.8
1,241,557	-		BWI76_RS05905	0.87	+0.5
1,241,571	-		BWI76_RS05905	0.88	-1.6
1,241,585	-				-1.1
1,241,603	+				-3.2
1,241,647	-				-2.9
1,241,728	+				-1.3
1,241,774	+				-1.6
1,241,782	-				+3.0
1,241,792	-		BWI76_RS05910	0.11	-0.0
1,241,792	-		BWI76_RS05910	0.11	-3.0
1,241,803	+		BWI76_RS05910	0.12	-0.7
1,241,803	+		BWI76_RS05910	0.12	-1.5
1,241,811	-		BWI76_RS05910	0.13	-0.9
1,241,811	-				-1.5
1,241,829	+		BWI76_RS05910	0.15	-0.2
1,241,834	+		BWI76_RS05910	0.16	+1.1
1,241,855	+		BWI76_RS05910	0.18	-0.0
1,241,855	+		BWI76_RS05910	0.18	+0.3
1,241,855	+		BWI76_RS05910	0.18	+0.3
1,241,855	+		BWI76_RS05910	0.18	-1.2
1,241,855	+		BWI76_RS05910	0.18	-0.3
1,241,855	+		BWI76_RS05910	0.18	-0.4
1,241,855	+		BWI76_RS05910	0.18	+0.5
1,241,855	+		BWI76_RS05910	0.18	-1.7
1,241,863	-		BWI76_RS05910	0.19	-0.8
1,241,863	-		BWI76_RS05910	0.19	-1.0
1,241,863	-		BWI76_RS05910	0.19	-3.5
1,241,863	-		BWI76_RS05910	0.19	+0.5
1,241,863	-		BWI76_RS05910	0.19	+0.2
1,241,863	-		BWI76_RS05910	0.19	-1.9
1,241,863	-		BWI76_RS05910	0.19	-1.9
1,241,924	+		BWI76_RS05910	0.26	-0.0
1,241,932	-		BWI76_RS05910	0.27	-1.8
1,241,939	+		BWI76_RS05910	0.28	-0.2
1,241,939	+		BWI76_RS05910	0.28	-0.5
1,241,947	-		BWI76_RS05910	0.29	-0.1
1,242,283	-		BWI76_RS05910	0.69	-0.1
1,242,285	+		BWI76_RS05910	0.69	-0.6
1,242,338	-		BWI76_RS05910	0.75	-0.8
1,242,411	+		BWI76_RS05910	0.84	+0.3
1,242,411	+		BWI76_RS05910	0.84	-0.7
1,242,484	+				+1.4
1,242,484	+				+0.1
1,242,484	+				+0.7
1,242,484	+				-1.7
1,242,484	+				-0.6
1,242,484	+				+0.4
1,242,484	+				-0.5
1,242,484	+				-0.5
1,242,484	+				-0.6
1,242,484	+				-0.2
1,242,492	-				-2.0
1,242,492	-				-0.6
1,242,492	-				-0.6
1,242,492	-				-1.0
1,242,530	+				-0.3
1,242,592	+				-2.0
1,242,619	-				+0.8
1,242,629	-				-0.7
1,242,644	+				-1.0
1,242,652	-				+1.2
1,242,672	+				-0.5
1,242,677	-				-1.6
1,242,677	-				-1.6
1,242,678	+				-0.5
1,242,678	+				-1.5