Experiment: KLEB29 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS05795 and BWI76_RS05800 overlap by 4 nucleotides BWI76_RS05800 and BWI76_RS05805 are separated by 17 nucleotides BWI76_RS05805 and BWI76_RS05810 overlap by 37 nucleotides
BWI76_RS05795: BWI76_RS05795 - hypothetical protein, at 1,218,815 to 1,219,552
_RS05795
BWI76_RS05800: BWI76_RS05800 - phage transcriptional activator, Ogr/delta, at 1,219,549 to 1,219,794
_RS05800
BWI76_RS05805: BWI76_RS05805 - phage polarity suppression protein, at 1,219,812 to 1,220,378
_RS05805
BWI76_RS05810: BWI76_RS05810 - hypothetical protein, at 1,220,342 to 1,220,527
_RS05810
Position (kb)
1219
1220 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1218.756 kb on + strand at 1218.859 kb on + strand at 1218.920 kb on - strand, within BWI76_RS05795 at 1218.934 kb on - strand, within BWI76_RS05795 at 1219.129 kb on + strand, within BWI76_RS05795 at 1219.137 kb on - strand at 1219.192 kb on - strand, within BWI76_RS05795 at 1219.233 kb on - strand, within BWI76_RS05795 at 1219.320 kb on - strand, within BWI76_RS05795 at 1219.380 kb on + strand, within BWI76_RS05795 at 1219.532 kb on - strand at 1219.752 kb on + strand, within BWI76_RS05800 at 1219.947 kb on - strand, within BWI76_RS05805 at 1219.965 kb on - strand, within BWI76_RS05805 at 1219.980 kb on - strand, within BWI76_RS05805 at 1219.996 kb on + strand, within BWI76_RS05805 at 1220.092 kb on + strand, within BWI76_RS05805 at 1220.105 kb on - strand, within BWI76_RS05805 at 1220.161 kb on + strand, within BWI76_RS05805 at 1220.166 kb on + strand, within BWI76_RS05805 at 1220.166 kb on + strand, within BWI76_RS05805 at 1220.166 kb on + strand, within BWI76_RS05805 at 1220.213 kb on + strand, within BWI76_RS05805 at 1220.221 kb on - strand, within BWI76_RS05805 at 1220.361 kb on + strand at 1220.432 kb on - strand, within BWI76_RS05810 at 1220.628 kb on + strand at 1220.638 kb on + strand at 1220.638 kb on + strand at 1220.656 kb on + strand at 1220.656 kb on + strand at 1220.664 kb on - strand at 1220.672 kb on + strand at 1220.672 kb on + strand at 1220.672 kb on + strand at 1220.677 kb on + strand at 1220.677 kb on + strand at 1220.734 kb on - strand at 1220.774 kb on + strand at 1220.783 kb on + strand at 1220.791 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB29 MOI 1 remove 1,218,756 + -0.6 1,218,859 + -1.5 1,218,920 - BWI76_RS05795 0.14 +0.0 1,218,934 - BWI76_RS05795 0.16 -1.3 1,219,129 + BWI76_RS05795 0.43 -1.6 1,219,137 - +1.4 1,219,192 - BWI76_RS05795 0.51 +0.4 1,219,233 - BWI76_RS05795 0.57 +0.2 1,219,320 - BWI76_RS05795 0.68 -0.8 1,219,380 + BWI76_RS05795 0.77 -2.0 1,219,532 - -0.6 1,219,752 + BWI76_RS05800 0.83 -1.2 1,219,947 - BWI76_RS05805 0.24 -1.5 1,219,965 - BWI76_RS05805 0.27 -0.3 1,219,980 - BWI76_RS05805 0.30 -0.5 1,219,996 + BWI76_RS05805 0.32 -1.8 1,220,092 + BWI76_RS05805 0.49 -0.8 1,220,105 - BWI76_RS05805 0.52 -1.0 1,220,161 + BWI76_RS05805 0.62 -1.5 1,220,166 + BWI76_RS05805 0.62 +0.1 1,220,166 + BWI76_RS05805 0.62 -0.1 1,220,166 + BWI76_RS05805 0.62 -0.2 1,220,213 + BWI76_RS05805 0.71 -1.6 1,220,221 - BWI76_RS05805 0.72 +0.1 1,220,361 + -1.5 1,220,432 - BWI76_RS05810 0.48 -3.4 1,220,628 + -1.8 1,220,638 + -1.9 1,220,638 + -1.2 1,220,656 + -2.4 1,220,656 + +1.1 1,220,664 - +0.7 1,220,672 + -0.9 1,220,672 + -1.9 1,220,672 + -0.3 1,220,677 + -1.5 1,220,677 + -1.3 1,220,734 - -1.6 1,220,774 + -0.1 1,220,783 + -1.2 1,220,791 - +1.3
Or see this region's nucleotide sequence