Experiment: KLEB29 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03920 and BWI76_RS03925 are separated by 32 nucleotides BWI76_RS03925 and BWI76_RS03930 are separated by 3 nucleotides BWI76_RS03930 and BWI76_RS03935 are separated by 179 nucleotides
BWI76_RS03920: BWI76_RS03920 - N-acetyltransferase, at 810,108 to 810,641
_RS03920
BWI76_RS03925: BWI76_RS03925 - N-acetyltransferase GCN5, at 810,674 to 811,510
_RS03925
BWI76_RS03930: BWI76_RS03930 - MFS transporter, at 811,514 to 812,875
_RS03930
BWI76_RS03935: BWI76_RS03935 - GntR family transcriptional regulator, at 813,055 to 813,969
_RS03935
Position (kb) 811
812
813 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 810.649 kb on + strand at 810.669 kb on + strand at 810.687 kb on - strand at 810.723 kb on + strand at 810.810 kb on + strand, within BWI76_RS03925 at 811.013 kb on - strand, within BWI76_RS03925 at 811.067 kb on - strand, within BWI76_RS03925 at 811.141 kb on - strand, within BWI76_RS03925 at 811.142 kb on - strand, within BWI76_RS03925 at 811.274 kb on + strand, within BWI76_RS03925 at 811.557 kb on + strand at 811.654 kb on + strand, within BWI76_RS03930 at 811.693 kb on - strand, within BWI76_RS03930 at 811.693 kb on - strand, within BWI76_RS03930 at 811.695 kb on + strand, within BWI76_RS03930 at 811.714 kb on + strand, within BWI76_RS03930 at 811.770 kb on + strand, within BWI76_RS03930 at 811.775 kb on + strand, within BWI76_RS03930 at 811.775 kb on + strand, within BWI76_RS03930 at 811.845 kb on - strand at 811.851 kb on + strand, within BWI76_RS03930 at 811.851 kb on + strand, within BWI76_RS03930 at 812.017 kb on - strand, within BWI76_RS03930 at 812.054 kb on - strand at 812.059 kb on + strand, within BWI76_RS03930 at 812.212 kb on + strand, within BWI76_RS03930 at 812.351 kb on - strand, within BWI76_RS03930 at 812.358 kb on + strand, within BWI76_RS03930 at 812.366 kb on - strand, within BWI76_RS03930 at 812.366 kb on - strand, within BWI76_RS03930 at 812.432 kb on - strand, within BWI76_RS03930 at 812.509 kb on + strand, within BWI76_RS03930 at 812.511 kb on + strand, within BWI76_RS03930 at 812.519 kb on - strand, within BWI76_RS03930 at 812.560 kb on + strand, within BWI76_RS03930 at 812.570 kb on - strand, within BWI76_RS03930 at 812.578 kb on - strand, within BWI76_RS03930 at 812.578 kb on - strand, within BWI76_RS03930 at 812.599 kb on - strand at 812.604 kb on + strand, within BWI76_RS03930 at 812.604 kb on + strand, within BWI76_RS03930 at 812.612 kb on - strand, within BWI76_RS03930 at 812.612 kb on - strand, within BWI76_RS03930 at 812.612 kb on - strand, within BWI76_RS03930 at 812.612 kb on - strand, within BWI76_RS03930 at 812.612 kb on - strand, within BWI76_RS03930 at 812.624 kb on + strand, within BWI76_RS03930 at 812.634 kb on + strand, within BWI76_RS03930 at 812.647 kb on - strand, within BWI76_RS03930 at 812.656 kb on + strand, within BWI76_RS03930 at 812.664 kb on - strand, within BWI76_RS03930 at 812.665 kb on - strand, within BWI76_RS03930 at 812.665 kb on - strand, within BWI76_RS03930 at 812.665 kb on - strand, within BWI76_RS03930 at 812.665 kb on - strand, within BWI76_RS03930 at 812.665 kb on - strand, within BWI76_RS03930 at 812.665 kb on - strand, within BWI76_RS03930 at 812.665 kb on - strand, within BWI76_RS03930 at 812.689 kb on - strand, within BWI76_RS03930 at 812.692 kb on + strand, within BWI76_RS03930 at 812.692 kb on + strand, within BWI76_RS03930 at 812.692 kb on + strand, within BWI76_RS03930 at 812.693 kb on + strand, within BWI76_RS03930 at 812.700 kb on - strand, within BWI76_RS03930 at 812.701 kb on - strand, within BWI76_RS03930 at 812.703 kb on - strand, within BWI76_RS03930 at 812.722 kb on - strand, within BWI76_RS03930 at 812.798 kb on - strand at 812.875 kb on + strand at 812.890 kb on - strand at 812.921 kb on + strand at 812.921 kb on + strand at 812.921 kb on + strand at 812.921 kb on + strand at 812.929 kb on - strand at 812.929 kb on - strand at 812.945 kb on - strand at 812.999 kb on + strand at 813.007 kb on - strand at 813.007 kb on - strand at 813.021 kb on - strand at 813.040 kb on + strand at 813.059 kb on - strand at 813.059 kb on - strand at 813.067 kb on + strand at 813.076 kb on - strand at 813.078 kb on + strand at 813.078 kb on + strand at 813.078 kb on + strand at 813.084 kb on - strand at 813.086 kb on + strand at 813.086 kb on - strand at 813.086 kb on - strand at 813.086 kb on - strand at 813.086 kb on - strand at 813.086 kb on - strand at 813.107 kb on + strand at 813.110 kb on + strand at 813.110 kb on + strand at 813.112 kb on + strand at 813.112 kb on + strand at 813.118 kb on - strand at 813.119 kb on + strand at 813.119 kb on + strand at 813.119 kb on + strand at 813.119 kb on + strand at 813.120 kb on - strand at 813.129 kb on + strand at 813.129 kb on + strand at 813.129 kb on - strand at 813.132 kb on - strand at 813.135 kb on + strand at 813.155 kb on + strand, within BWI76_RS03935 at 813.213 kb on + strand, within BWI76_RS03935 at 813.213 kb on + strand, within BWI76_RS03935 at 813.401 kb on + strand, within BWI76_RS03935 at 813.409 kb on - strand, within BWI76_RS03935 at 813.439 kb on + strand, within BWI76_RS03935 at 813.448 kb on + strand, within BWI76_RS03935 at 813.448 kb on + strand, within BWI76_RS03935 at 813.456 kb on - strand, within BWI76_RS03935 at 813.500 kb on + strand, within BWI76_RS03935 at 813.508 kb on - strand, within BWI76_RS03935 at 813.508 kb on - strand, within BWI76_RS03935 at 813.508 kb on - strand, within BWI76_RS03935 at 813.510 kb on + strand, within BWI76_RS03935 at 813.513 kb on - strand, within BWI76_RS03935 at 813.605 kb on - strand, within BWI76_RS03935 at 813.753 kb on + strand, within BWI76_RS03935 at 813.781 kb on - strand, within BWI76_RS03935 at 813.782 kb on + strand, within BWI76_RS03935 at 813.801 kb on - strand, within BWI76_RS03935 at 813.845 kb on - strand, within BWI76_RS03935 at 813.853 kb on + strand, within BWI76_RS03935 at 813.860 kb on + strand, within BWI76_RS03935
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB29 MOI 1 remove 810,649 + -0.7 810,669 + -0.5 810,687 - -0.6 810,723 + -0.9 810,810 + BWI76_RS03925 0.16 -0.6 811,013 - BWI76_RS03925 0.41 -2.0 811,067 - BWI76_RS03925 0.47 -0.7 811,141 - BWI76_RS03925 0.56 +0.6 811,142 - BWI76_RS03925 0.56 +0.9 811,274 + BWI76_RS03925 0.72 +1.0 811,557 + +0.2 811,654 + BWI76_RS03930 0.10 -1.8 811,693 - BWI76_RS03930 0.13 -0.2 811,693 - BWI76_RS03930 0.13 -0.5 811,695 + BWI76_RS03930 0.13 -1.1 811,714 + BWI76_RS03930 0.15 -0.4 811,770 + BWI76_RS03930 0.19 -0.3 811,775 + BWI76_RS03930 0.19 +0.2 811,775 + BWI76_RS03930 0.19 +0.3 811,845 - -1.0 811,851 + BWI76_RS03930 0.25 +1.1 811,851 + BWI76_RS03930 0.25 -0.2 812,017 - BWI76_RS03930 0.37 -0.6 812,054 - -0.6 812,059 + BWI76_RS03930 0.40 -0.4 812,212 + BWI76_RS03930 0.51 +0.3 812,351 - BWI76_RS03930 0.61 -2.0 812,358 + BWI76_RS03930 0.62 -1.0 812,366 - BWI76_RS03930 0.63 -1.2 812,366 - BWI76_RS03930 0.63 -2.1 812,432 - BWI76_RS03930 0.67 +1.7 812,509 + BWI76_RS03930 0.73 -1.2 812,511 + BWI76_RS03930 0.73 -0.2 812,519 - BWI76_RS03930 0.74 +0.6 812,560 + BWI76_RS03930 0.77 -0.1 812,570 - BWI76_RS03930 0.78 +0.0 812,578 - BWI76_RS03930 0.78 -0.6 812,578 - BWI76_RS03930 0.78 -0.9 812,599 - +0.5 812,604 + BWI76_RS03930 0.80 -0.2 812,604 + BWI76_RS03930 0.80 -0.2 812,612 - BWI76_RS03930 0.81 +1.0 812,612 - BWI76_RS03930 0.81 +0.3 812,612 - BWI76_RS03930 0.81 -1.4 812,612 - BWI76_RS03930 0.81 -2.0 812,612 - BWI76_RS03930 0.81 -1.0 812,624 + BWI76_RS03930 0.81 -0.4 812,634 + BWI76_RS03930 0.82 -0.6 812,647 - BWI76_RS03930 0.83 +0.5 812,656 + BWI76_RS03930 0.84 -0.0 812,664 - BWI76_RS03930 0.84 -0.9 812,665 - BWI76_RS03930 0.85 +0.1 812,665 - BWI76_RS03930 0.85 -0.3 812,665 - BWI76_RS03930 0.85 -0.3 812,665 - BWI76_RS03930 0.85 -0.5 812,665 - BWI76_RS03930 0.85 -0.3 812,665 - BWI76_RS03930 0.85 -1.9 812,665 - BWI76_RS03930 0.85 +1.0 812,689 - BWI76_RS03930 0.86 +1.0 812,692 + BWI76_RS03930 0.86 -0.6 812,692 + BWI76_RS03930 0.86 -0.4 812,692 + BWI76_RS03930 0.86 -0.6 812,693 + BWI76_RS03930 0.87 +2.0 812,700 - BWI76_RS03930 0.87 -1.4 812,701 - BWI76_RS03930 0.87 -1.8 812,703 - BWI76_RS03930 0.87 -0.5 812,722 - BWI76_RS03930 0.89 -0.4 812,798 - -2.4 812,875 + -0.0 812,890 - -2.4 812,921 + -1.1 812,921 + -0.8 812,921 + +2.0 812,921 + +0.0 812,929 - -0.7 812,929 - -0.3 812,945 - +0.3 812,999 + -1.0 813,007 - +2.3 813,007 - +1.0 813,021 - -0.8 813,040 + -0.7 813,059 - -0.0 813,059 - -1.4 813,067 + -0.9 813,076 - -0.6 813,078 + -0.0 813,078 + -0.2 813,078 + -0.0 813,084 - -1.7 813,086 + -1.5 813,086 - -0.6 813,086 - -0.6 813,086 - +0.8 813,086 - +1.3 813,086 - -1.4 813,107 + -1.3 813,110 + +0.1 813,110 + +0.2 813,112 + -1.6 813,112 + +0.2 813,118 - -1.0 813,119 + -2.0 813,119 + -0.6 813,119 + -0.7 813,119 + +1.5 813,120 - -1.4 813,129 + -0.8 813,129 + +2.3 813,129 - +0.2 813,132 - +2.2 813,135 + -0.5 813,155 + BWI76_RS03935 0.11 -0.6 813,213 + BWI76_RS03935 0.17 +2.2 813,213 + BWI76_RS03935 0.17 -3.7 813,401 + BWI76_RS03935 0.38 -0.0 813,409 - BWI76_RS03935 0.39 +0.1 813,439 + BWI76_RS03935 0.42 -0.2 813,448 + BWI76_RS03935 0.43 -2.0 813,448 + BWI76_RS03935 0.43 +0.5 813,456 - BWI76_RS03935 0.44 +0.3 813,500 + BWI76_RS03935 0.49 -0.0 813,508 - BWI76_RS03935 0.50 +1.1 813,508 - BWI76_RS03935 0.50 -0.2 813,508 - BWI76_RS03935 0.50 +0.7 813,510 + BWI76_RS03935 0.50 +0.3 813,513 - BWI76_RS03935 0.50 -1.7 813,605 - BWI76_RS03935 0.60 -0.6 813,753 + BWI76_RS03935 0.76 -0.8 813,781 - BWI76_RS03935 0.79 -3.6 813,782 + BWI76_RS03935 0.79 -1.7 813,801 - BWI76_RS03935 0.82 +0.1 813,845 - BWI76_RS03935 0.86 +0.7 813,853 + BWI76_RS03935 0.87 -1.8 813,860 + BWI76_RS03935 0.88 +0.0
Or see this region's nucleotide sequence