Experiment: KLEB26 MOI0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27715 and BWI76_RS27720 are separated by 249 nucleotides BWI76_RS27720 and BWI76_RS27725 are separated by 3 nucleotides BWI76_RS27725 and BWI76_RS27730 overlap by 1 nucleotides
BWI76_RS27715: BWI76_RS27715 - PTS N-acetylmuramic acid transporter subunits IIBC, at 5,752,134 to 5,753,567
_RS27715
BWI76_RS27720: BWI76_RS27720 - carboxylate/amino acid/amine transporter, at 5,753,817 to 5,754,719
_RS27720
BWI76_RS27725: BWI76_RS27725 - hypothetical protein, at 5,754,723 to 5,754,980
_RS27725
BWI76_RS27730: BWI76_RS27730 - ISNCY family transposase, at 5,754,980 to 5,755,933
_RS27730
Position (kb)
5753
5754
5755 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5753.007 kb on - strand, within BWI76_RS27715 at 5753.018 kb on + strand, within BWI76_RS27715 at 5753.046 kb on - strand, within BWI76_RS27715 at 5753.096 kb on - strand, within BWI76_RS27715 at 5753.110 kb on + strand, within BWI76_RS27715 at 5753.120 kb on + strand, within BWI76_RS27715 at 5753.142 kb on - strand, within BWI76_RS27715 at 5753.180 kb on + strand, within BWI76_RS27715 at 5753.193 kb on - strand, within BWI76_RS27715 at 5753.531 kb on - strand at 5753.531 kb on - strand at 5753.681 kb on + strand at 5753.716 kb on + strand at 5753.724 kb on - strand at 5753.724 kb on - strand at 5753.798 kb on + strand at 5753.857 kb on + strand at 5753.883 kb on - strand at 5753.943 kb on + strand, within BWI76_RS27720 at 5753.992 kb on + strand, within BWI76_RS27720 at 5754.116 kb on + strand, within BWI76_RS27720 at 5754.196 kb on - strand, within BWI76_RS27720 at 5754.288 kb on + strand, within BWI76_RS27720 at 5754.293 kb on + strand, within BWI76_RS27720 at 5754.293 kb on + strand, within BWI76_RS27720 at 5754.296 kb on - strand, within BWI76_RS27720 at 5754.301 kb on - strand, within BWI76_RS27720 at 5754.301 kb on - strand, within BWI76_RS27720 at 5754.457 kb on + strand, within BWI76_RS27720 at 5754.502 kb on - strand, within BWI76_RS27720 at 5754.511 kb on + strand, within BWI76_RS27720 at 5754.519 kb on - strand, within BWI76_RS27720 at 5754.519 kb on - strand, within BWI76_RS27720 at 5754.582 kb on - strand, within BWI76_RS27720 at 5754.602 kb on - strand, within BWI76_RS27720 at 5754.625 kb on + strand, within BWI76_RS27720 at 5754.869 kb on + strand at 5754.898 kb on + strand at 5754.963 kb on + strand at 5755.016 kb on - strand at 5755.039 kb on + strand at 5755.231 kb on + strand, within BWI76_RS27730 at 5755.239 kb on - strand, within BWI76_RS27730 at 5755.290 kb on - strand, within BWI76_RS27730 at 5755.295 kb on - strand, within BWI76_RS27730 at 5755.315 kb on + strand, within BWI76_RS27730 at 5755.434 kb on - strand, within BWI76_RS27730 at 5755.539 kb on + strand, within BWI76_RS27730 at 5755.568 kb on - strand, within BWI76_RS27730 at 5755.671 kb on + strand, within BWI76_RS27730 at 5755.676 kb on + strand, within BWI76_RS27730 at 5755.684 kb on - strand, within BWI76_RS27730 at 5755.701 kb on + strand, within BWI76_RS27730
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB26 MOI0.1 remove 5,753,007 - BWI76_RS27715 0.61 -0.4 5,753,018 + BWI76_RS27715 0.62 -0.1 5,753,046 - BWI76_RS27715 0.64 -0.5 5,753,096 - BWI76_RS27715 0.67 -0.3 5,753,110 + BWI76_RS27715 0.68 +0.3 5,753,120 + BWI76_RS27715 0.69 +0.1 5,753,142 - BWI76_RS27715 0.70 -2.6 5,753,180 + BWI76_RS27715 0.73 +0.1 5,753,193 - BWI76_RS27715 0.74 +0.3 5,753,531 - +0.6 5,753,531 - +0.2 5,753,681 + -0.6 5,753,716 + -0.1 5,753,724 - +2.2 5,753,724 - +0.0 5,753,798 + -0.5 5,753,857 + +0.1 5,753,883 - +1.0 5,753,943 + BWI76_RS27720 0.14 +0.2 5,753,992 + BWI76_RS27720 0.19 -0.5 5,754,116 + BWI76_RS27720 0.33 +0.7 5,754,196 - BWI76_RS27720 0.42 +0.6 5,754,288 + BWI76_RS27720 0.52 +0.2 5,754,293 + BWI76_RS27720 0.53 -1.3 5,754,293 + BWI76_RS27720 0.53 +0.2 5,754,296 - BWI76_RS27720 0.53 +0.1 5,754,301 - BWI76_RS27720 0.54 +0.6 5,754,301 - BWI76_RS27720 0.54 +1.1 5,754,457 + BWI76_RS27720 0.71 +1.2 5,754,502 - BWI76_RS27720 0.76 +1.7 5,754,511 + BWI76_RS27720 0.77 +0.7 5,754,519 - BWI76_RS27720 0.78 +0.2 5,754,519 - BWI76_RS27720 0.78 -0.2 5,754,582 - BWI76_RS27720 0.85 +0.7 5,754,602 - BWI76_RS27720 0.87 +0.8 5,754,625 + BWI76_RS27720 0.89 +1.2 5,754,869 + -1.9 5,754,898 + +0.7 5,754,963 + -0.3 5,755,016 - -0.6 5,755,039 + +0.1 5,755,231 + BWI76_RS27730 0.26 +1.0 5,755,239 - BWI76_RS27730 0.27 +0.2 5,755,290 - BWI76_RS27730 0.32 -0.0 5,755,295 - BWI76_RS27730 0.33 +1.7 5,755,315 + BWI76_RS27730 0.35 -0.1 5,755,434 - BWI76_RS27730 0.48 -0.2 5,755,539 + BWI76_RS27730 0.59 +1.0 5,755,568 - BWI76_RS27730 0.62 +0.5 5,755,671 + BWI76_RS27730 0.72 +0.7 5,755,676 + BWI76_RS27730 0.73 +1.0 5,755,684 - BWI76_RS27730 0.74 +0.2 5,755,701 + BWI76_RS27730 0.76 -0.6
Or see this region's nucleotide sequence