Experiment: KLEB26 MOI0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24615 and BWI76_RS24620 are separated by 236 nucleotides BWI76_RS24620 and BWI76_RS24625 are separated by 113 nucleotides BWI76_RS24625 and BWI76_RS24630 overlap by 92 nucleotides
BWI76_RS24615: BWI76_RS24615 - siderophore-interacting protein, at 5,131,548 to 5,132,321
_RS24615
BWI76_RS24620: BWI76_RS24620 - PadR family transcriptional regulator, at 5,132,558 to 5,133,112
_RS24620
BWI76_RS24625: BWI76_RS24625 - hypothetical protein, at 5,133,226 to 5,133,417
_RS24625
BWI76_RS24630: BWI76_RS24630 - putrescine aminotransferase, at 5,133,326 to 5,134,732
_RS24630
Position (kb) 5133
5134 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5132.304 kb on - strand at 5132.304 kb on - strand at 5132.588 kb on - strand at 5132.764 kb on - strand at 5132.940 kb on + strand, within BWI76_RS24620 at 5132.960 kb on - strand, within BWI76_RS24620 at 5132.960 kb on - strand, within BWI76_RS24620 at 5132.960 kb on - strand, within BWI76_RS24620 at 5132.977 kb on + strand, within BWI76_RS24620 at 5133.122 kb on - strand at 5133.188 kb on - strand at 5133.282 kb on + strand, within BWI76_RS24625 at 5133.309 kb on + strand, within BWI76_RS24625 at 5133.317 kb on - strand, within BWI76_RS24625 at 5133.338 kb on + strand at 5133.360 kb on + strand at 5133.367 kb on - strand at 5133.646 kb on + strand, within BWI76_RS24630 at 5133.914 kb on + strand, within BWI76_RS24630 at 5134.078 kb on - strand, within BWI76_RS24630 at 5134.153 kb on + strand, within BWI76_RS24630 at 5134.369 kb on - strand, within BWI76_RS24630 at 5134.415 kb on - strand, within BWI76_RS24630
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB26 MOI0.1 remove 5,132,304 - +0.1 5,132,304 - -0.5 5,132,588 - +1.8 5,132,764 - +0.5 5,132,940 + BWI76_RS24620 0.69 -1.1 5,132,960 - BWI76_RS24620 0.72 -0.8 5,132,960 - BWI76_RS24620 0.72 -0.3 5,132,960 - BWI76_RS24620 0.72 +0.4 5,132,977 + BWI76_RS24620 0.75 -0.2 5,133,122 - -1.3 5,133,188 - +0.4 5,133,282 + BWI76_RS24625 0.29 -0.4 5,133,309 + BWI76_RS24625 0.43 -1.6 5,133,317 - BWI76_RS24625 0.47 -0.6 5,133,338 + -1.1 5,133,360 + -2.7 5,133,367 - -0.6 5,133,646 + BWI76_RS24630 0.23 -0.0 5,133,914 + BWI76_RS24630 0.42 -0.3 5,134,078 - BWI76_RS24630 0.53 -1.1 5,134,153 + BWI76_RS24630 0.59 -0.7 5,134,369 - BWI76_RS24630 0.74 -0.1 5,134,415 - BWI76_RS24630 0.77 -0.6
Or see this region's nucleotide sequence