Experiment: KLEB26 MOI0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20705 and BWI76_RS20710 are separated by 219 nucleotides BWI76_RS20710 and BWI76_RS20715 are separated by 96 nucleotides BWI76_RS20715 and BWI76_RS20720 are separated by 63 nucleotides
BWI76_RS20705: BWI76_RS20705 - thiosulfate transporter subunit, at 4,330,659 to 4,331,675
_RS20705
BWI76_RS20710: BWI76_RS20710 - dyp-type peroxidase family protein, at 4,331,895 to 4,332,794
_RS20710
BWI76_RS20715: BWI76_RS20715 - RpoE-regulated lipoprotein, at 4,332,891 to 4,333,466
_RS20715
BWI76_RS20720: BWI76_RS20720 - hypothetical protein, at 4,333,530 to 4,333,979
_RS20720
Position (kb) 4331
4332
4333 Strain fitness (log2 ratio) -2
-1
0
1 at 4330.980 kb on + strand, within BWI76_RS20705 at 4331.072 kb on - strand, within BWI76_RS20705 at 4331.253 kb on + strand, within BWI76_RS20705 at 4331.340 kb on - strand, within BWI76_RS20705 at 4331.370 kb on - strand, within BWI76_RS20705 at 4331.440 kb on - strand, within BWI76_RS20705 at 4331.509 kb on + strand, within BWI76_RS20705 at 4331.586 kb on + strand at 4331.737 kb on + strand at 4331.874 kb on + strand at 4331.916 kb on - strand at 4332.025 kb on - strand at 4332.106 kb on + strand, within BWI76_RS20710 at 4332.157 kb on - strand, within BWI76_RS20710 at 4332.157 kb on - strand, within BWI76_RS20710 at 4332.245 kb on - strand, within BWI76_RS20710 at 4332.251 kb on + strand, within BWI76_RS20710 at 4332.392 kb on + strand, within BWI76_RS20710 at 4332.482 kb on - strand, within BWI76_RS20710 at 4333.346 kb on + strand, within BWI76_RS20715 at 4333.453 kb on - strand at 4333.570 kb on - strand at 4333.570 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB26 MOI0.1 remove 4,330,980 + BWI76_RS20705 0.32 +0.0 4,331,072 - BWI76_RS20705 0.41 -0.6 4,331,253 + BWI76_RS20705 0.58 -0.1 4,331,340 - BWI76_RS20705 0.67 +0.1 4,331,370 - BWI76_RS20705 0.70 -0.3 4,331,440 - BWI76_RS20705 0.77 -0.3 4,331,509 + BWI76_RS20705 0.84 -0.8 4,331,586 + -0.6 4,331,737 + -0.4 4,331,874 + +1.0 4,331,916 - -0.8 4,332,025 - -1.6 4,332,106 + BWI76_RS20710 0.23 -0.6 4,332,157 - BWI76_RS20710 0.29 -0.8 4,332,157 - BWI76_RS20710 0.29 -0.2 4,332,245 - BWI76_RS20710 0.39 -1.9 4,332,251 + BWI76_RS20710 0.40 -0.6 4,332,392 + BWI76_RS20710 0.55 -0.4 4,332,482 - BWI76_RS20710 0.65 -1.5 4,333,346 + BWI76_RS20715 0.79 -0.7 4,333,453 - +0.1 4,333,570 - +0.4 4,333,570 - -0.2
Or see this region's nucleotide sequence