Experiment: KLEB26 MOI0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19585 and BWI76_RS19590 are separated by 11 nucleotides BWI76_RS19590 and BWI76_RS19595 are separated by 126 nucleotides
BWI76_RS19585: BWI76_RS19585 - gentisate 1,2-dioxygenase, at 4,094,371 to 4,095,408
_RS19585
BWI76_RS19590: BWI76_RS19590 - MFS transporter, at 4,095,420 to 4,096,778
_RS19590
BWI76_RS19595: BWI76_RS19595 - hypothetical protein, at 4,096,905 to 4,097,822
_RS19595
Position (kb)
4095
4096
4097 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4094.553 kb on - strand, within BWI76_RS19585 at 4094.733 kb on - strand, within BWI76_RS19585 at 4094.905 kb on - strand, within BWI76_RS19585 at 4095.479 kb on + strand at 4095.500 kb on + strand at 4095.641 kb on - strand, within BWI76_RS19590 at 4095.812 kb on - strand, within BWI76_RS19590 at 4096.395 kb on - strand, within BWI76_RS19590 at 4096.409 kb on + strand, within BWI76_RS19590 at 4096.417 kb on - strand, within BWI76_RS19590 at 4096.804 kb on - strand at 4097.321 kb on + strand, within BWI76_RS19595 at 4097.414 kb on - strand, within BWI76_RS19595 at 4097.477 kb on - strand, within BWI76_RS19595 at 4097.555 kb on + strand, within BWI76_RS19595 at 4097.672 kb on + strand, within BWI76_RS19595 at 4097.672 kb on + strand, within BWI76_RS19595 at 4097.672 kb on + strand, within BWI76_RS19595 at 4097.672 kb on + strand, within BWI76_RS19595 at 4097.680 kb on - strand, within BWI76_RS19595 at 4097.690 kb on - strand, within BWI76_RS19595 at 4097.726 kb on + strand, within BWI76_RS19595 at 4097.770 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB26 MOI0.1 remove 4,094,553 - BWI76_RS19585 0.18 -2.9 4,094,733 - BWI76_RS19585 0.35 -0.7 4,094,905 - BWI76_RS19585 0.51 +0.4 4,095,479 + +0.6 4,095,500 + -0.8 4,095,641 - BWI76_RS19590 0.16 -2.2 4,095,812 - BWI76_RS19590 0.29 -1.4 4,096,395 - BWI76_RS19590 0.72 -0.3 4,096,409 + BWI76_RS19590 0.73 -0.6 4,096,417 - BWI76_RS19590 0.73 -0.2 4,096,804 - +0.2 4,097,321 + BWI76_RS19595 0.45 +0.3 4,097,414 - BWI76_RS19595 0.55 -0.3 4,097,477 - BWI76_RS19595 0.62 -1.1 4,097,555 + BWI76_RS19595 0.71 -1.2 4,097,672 + BWI76_RS19595 0.84 -0.5 4,097,672 + BWI76_RS19595 0.84 +0.4 4,097,672 + BWI76_RS19595 0.84 -0.3 4,097,672 + BWI76_RS19595 0.84 +0.4 4,097,680 - BWI76_RS19595 0.84 +0.4 4,097,690 - BWI76_RS19595 0.86 +0.2 4,097,726 + BWI76_RS19595 0.89 -1.5 4,097,770 + -0.6
Or see this region's nucleotide sequence