Experiment: KLEB26 MOI0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18675 and BWI76_RS18680 are separated by 109 nucleotides BWI76_RS18680 and BWI76_RS18685 are separated by 38 nucleotides
BWI76_RS18675: BWI76_RS18675 - fimbrial protein, at 3,871,230 to 3,872,135
_RS18675
BWI76_RS18680: BWI76_RS18680 - EAL domain-containing protein, at 3,872,245 to 3,873,597
_RS18680
BWI76_RS18685: BWI76_RS18685 - 6-phospho-alpha-glucosidase, at 3,873,636 to 3,874,964
_RS18685
Position (kb)
3872
3873
3874 Strain fitness (log2 ratio)
-1
0
1 at 3871.467 kb on - strand, within BWI76_RS18675 at 3871.598 kb on + strand, within BWI76_RS18675 at 3872.041 kb on + strand, within BWI76_RS18675 at 3872.121 kb on - strand at 3872.330 kb on - strand at 3872.465 kb on - strand, within BWI76_RS18680 at 3872.624 kb on - strand, within BWI76_RS18680 at 3872.914 kb on - strand, within BWI76_RS18680 at 3872.991 kb on - strand, within BWI76_RS18680 at 3873.036 kb on - strand, within BWI76_RS18680 at 3873.397 kb on + strand, within BWI76_RS18680 at 3873.399 kb on - strand, within BWI76_RS18680 at 3873.644 kb on + strand at 3873.862 kb on - strand, within BWI76_RS18685 at 3874.140 kb on + strand, within BWI76_RS18685 at 3874.147 kb on - strand, within BWI76_RS18685 at 3874.147 kb on - strand, within BWI76_RS18685 at 3874.174 kb on + strand, within BWI76_RS18685 at 3874.174 kb on + strand, within BWI76_RS18685 at 3874.182 kb on - strand, within BWI76_RS18685 at 3874.182 kb on - strand, within BWI76_RS18685 at 3874.188 kb on + strand, within BWI76_RS18685 at 3874.193 kb on - strand, within BWI76_RS18685 at 3874.199 kb on + strand, within BWI76_RS18685 at 3874.210 kb on + strand, within BWI76_RS18685 at 3874.283 kb on - strand, within BWI76_RS18685 at 3874.283 kb on - strand, within BWI76_RS18685 at 3874.283 kb on - strand, within BWI76_RS18685 at 3874.284 kb on - strand, within BWI76_RS18685 at 3874.294 kb on - strand, within BWI76_RS18685 at 3874.344 kb on - strand, within BWI76_RS18685 at 3874.497 kb on + strand, within BWI76_RS18685 at 3874.520 kb on + strand, within BWI76_RS18685 at 3874.528 kb on - strand, within BWI76_RS18685 at 3874.577 kb on + strand, within BWI76_RS18685 at 3874.577 kb on + strand, within BWI76_RS18685
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB26 MOI0.1 remove 3,871,467 - BWI76_RS18675 0.26 -0.2 3,871,598 + BWI76_RS18675 0.41 -0.4 3,872,041 + BWI76_RS18675 0.90 -0.2 3,872,121 - -0.2 3,872,330 - +1.0 3,872,465 - BWI76_RS18680 0.16 -1.2 3,872,624 - BWI76_RS18680 0.28 -0.6 3,872,914 - BWI76_RS18680 0.49 -0.9 3,872,991 - BWI76_RS18680 0.55 -0.8 3,873,036 - BWI76_RS18680 0.58 +0.7 3,873,397 + BWI76_RS18680 0.85 -0.4 3,873,399 - BWI76_RS18680 0.85 -0.7 3,873,644 + -0.6 3,873,862 - BWI76_RS18685 0.17 -0.3 3,874,140 + BWI76_RS18685 0.38 -0.1 3,874,147 - BWI76_RS18685 0.38 +0.7 3,874,147 - BWI76_RS18685 0.38 +0.4 3,874,174 + BWI76_RS18685 0.40 +0.2 3,874,174 + BWI76_RS18685 0.40 -0.1 3,874,182 - BWI76_RS18685 0.41 -1.4 3,874,182 - BWI76_RS18685 0.41 +0.5 3,874,188 + BWI76_RS18685 0.42 -0.3 3,874,193 - BWI76_RS18685 0.42 -1.2 3,874,199 + BWI76_RS18685 0.42 -0.9 3,874,210 + BWI76_RS18685 0.43 -0.2 3,874,283 - BWI76_RS18685 0.49 -0.6 3,874,283 - BWI76_RS18685 0.49 +0.9 3,874,283 - BWI76_RS18685 0.49 +0.2 3,874,284 - BWI76_RS18685 0.49 +0.4 3,874,294 - BWI76_RS18685 0.50 +0.2 3,874,344 - BWI76_RS18685 0.53 -0.7 3,874,497 + BWI76_RS18685 0.65 +0.5 3,874,520 + BWI76_RS18685 0.67 +0.6 3,874,528 - BWI76_RS18685 0.67 -0.1 3,874,577 + BWI76_RS18685 0.71 -0.0 3,874,577 + BWI76_RS18685 0.71 +0.4
Or see this region's nucleotide sequence