Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18680

Experiment: KLEB26 MOI0.1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS18675 and BWI76_RS18680 are separated by 109 nucleotidesBWI76_RS18680 and BWI76_RS18685 are separated by 38 nucleotides BWI76_RS18675: BWI76_RS18675 - fimbrial protein, at 3,871,230 to 3,872,135 _RS18675 BWI76_RS18680: BWI76_RS18680 - EAL domain-containing protein, at 3,872,245 to 3,873,597 _RS18680 BWI76_RS18685: BWI76_RS18685 - 6-phospho-alpha-glucosidase, at 3,873,636 to 3,874,964 _RS18685 Position (kb) 3872 3873 3874Strain fitness (log2 ratio) -1 0 1at 3871.467 kb on - strand, within BWI76_RS18675at 3871.598 kb on + strand, within BWI76_RS18675at 3872.041 kb on + strand, within BWI76_RS18675at 3872.121 kb on - strandat 3872.330 kb on - strandat 3872.465 kb on - strand, within BWI76_RS18680at 3872.624 kb on - strand, within BWI76_RS18680at 3872.914 kb on - strand, within BWI76_RS18680at 3872.991 kb on - strand, within BWI76_RS18680at 3873.036 kb on - strand, within BWI76_RS18680at 3873.397 kb on + strand, within BWI76_RS18680at 3873.399 kb on - strand, within BWI76_RS18680at 3873.644 kb on + strandat 3873.862 kb on - strand, within BWI76_RS18685at 3874.140 kb on + strand, within BWI76_RS18685at 3874.147 kb on - strand, within BWI76_RS18685at 3874.147 kb on - strand, within BWI76_RS18685at 3874.174 kb on + strand, within BWI76_RS18685at 3874.174 kb on + strand, within BWI76_RS18685at 3874.182 kb on - strand, within BWI76_RS18685at 3874.182 kb on - strand, within BWI76_RS18685at 3874.188 kb on + strand, within BWI76_RS18685at 3874.193 kb on - strand, within BWI76_RS18685at 3874.199 kb on + strand, within BWI76_RS18685at 3874.210 kb on + strand, within BWI76_RS18685at 3874.283 kb on - strand, within BWI76_RS18685at 3874.283 kb on - strand, within BWI76_RS18685at 3874.283 kb on - strand, within BWI76_RS18685at 3874.284 kb on - strand, within BWI76_RS18685at 3874.294 kb on - strand, within BWI76_RS18685at 3874.344 kb on - strand, within BWI76_RS18685at 3874.497 kb on + strand, within BWI76_RS18685at 3874.520 kb on + strand, within BWI76_RS18685at 3874.528 kb on - strand, within BWI76_RS18685at 3874.577 kb on + strand, within BWI76_RS18685at 3874.577 kb on + strand, within BWI76_RS18685

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Per-strain Table

Position Strand Gene LocusTag Fraction KLEB26 MOI0.1
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3,871,467 - BWI76_RS18675 0.26 -0.2
3,871,598 + BWI76_RS18675 0.41 -0.4
3,872,041 + BWI76_RS18675 0.90 -0.2
3,872,121 - -0.2
3,872,330 - +1.0
3,872,465 - BWI76_RS18680 0.16 -1.2
3,872,624 - BWI76_RS18680 0.28 -0.6
3,872,914 - BWI76_RS18680 0.49 -0.9
3,872,991 - BWI76_RS18680 0.55 -0.8
3,873,036 - BWI76_RS18680 0.58 +0.7
3,873,397 + BWI76_RS18680 0.85 -0.4
3,873,399 - BWI76_RS18680 0.85 -0.7
3,873,644 + -0.6
3,873,862 - BWI76_RS18685 0.17 -0.3
3,874,140 + BWI76_RS18685 0.38 -0.1
3,874,147 - BWI76_RS18685 0.38 +0.7
3,874,147 - BWI76_RS18685 0.38 +0.4
3,874,174 + BWI76_RS18685 0.40 +0.2
3,874,174 + BWI76_RS18685 0.40 -0.1
3,874,182 - BWI76_RS18685 0.41 -1.4
3,874,182 - BWI76_RS18685 0.41 +0.5
3,874,188 + BWI76_RS18685 0.42 -0.3
3,874,193 - BWI76_RS18685 0.42 -1.2
3,874,199 + BWI76_RS18685 0.42 -0.9
3,874,210 + BWI76_RS18685 0.43 -0.2
3,874,283 - BWI76_RS18685 0.49 -0.6
3,874,283 - BWI76_RS18685 0.49 +0.9
3,874,283 - BWI76_RS18685 0.49 +0.2
3,874,284 - BWI76_RS18685 0.49 +0.4
3,874,294 - BWI76_RS18685 0.50 +0.2
3,874,344 - BWI76_RS18685 0.53 -0.7
3,874,497 + BWI76_RS18685 0.65 +0.5
3,874,520 + BWI76_RS18685 0.67 +0.6
3,874,528 - BWI76_RS18685 0.67 -0.1
3,874,577 + BWI76_RS18685 0.71 -0.0
3,874,577 + BWI76_RS18685 0.71 +0.4

Or see this region's nucleotide sequence