Experiment: KLEB26 MOI0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16715 and BWI76_RS16720 are separated by 725 nucleotides BWI76_RS16720 and BWI76_RS16725 are separated by 92 nucleotides
BWI76_RS16715: BWI76_RS16715 - hypothetical protein, at 3,460,760 to 3,461,668
_RS16715
BWI76_RS16720: BWI76_RS16720 - hypothetical protein, at 3,462,394 to 3,463,731
_RS16720
BWI76_RS16725: BWI76_RS16725 - Na+/H+ antiporter NhaC-like protein, at 3,463,824 to 3,465,242
_RS16725
Position (kb)
3462
3463
3464 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3461.398 kb on - strand, within BWI76_RS16715 at 3461.398 kb on - strand, within BWI76_RS16715 at 3461.442 kb on + strand, within BWI76_RS16715 at 3461.482 kb on - strand, within BWI76_RS16715 at 3461.497 kb on - strand, within BWI76_RS16715 at 3461.512 kb on - strand, within BWI76_RS16715 at 3461.562 kb on - strand, within BWI76_RS16715 at 3461.604 kb on - strand at 3461.655 kb on - strand at 3461.655 kb on - strand at 3461.673 kb on - strand at 3461.738 kb on - strand at 3461.868 kb on - strand at 3461.883 kb on + strand at 3461.883 kb on + strand at 3461.883 kb on + strand at 3461.883 kb on + strand at 3461.918 kb on - strand at 3461.923 kb on - strand at 3461.930 kb on + strand at 3462.033 kb on + strand at 3462.083 kb on + strand at 3462.306 kb on - strand at 3462.322 kb on + strand at 3462.498 kb on + strand at 3462.621 kb on + strand, within BWI76_RS16720 at 3462.629 kb on - strand, within BWI76_RS16720 at 3462.681 kb on + strand, within BWI76_RS16720 at 3462.731 kb on - strand, within BWI76_RS16720 at 3463.089 kb on - strand, within BWI76_RS16720 at 3463.421 kb on + strand, within BWI76_RS16720 at 3463.659 kb on - strand at 3463.726 kb on + strand at 3463.769 kb on - strand at 3463.877 kb on + strand at 3464.053 kb on - strand, within BWI76_RS16725 at 3464.184 kb on - strand, within BWI76_RS16725 at 3464.201 kb on - strand, within BWI76_RS16725 at 3464.274 kb on + strand, within BWI76_RS16725 at 3464.282 kb on + strand, within BWI76_RS16725 at 3464.365 kb on - strand, within BWI76_RS16725 at 3464.372 kb on + strand, within BWI76_RS16725 at 3464.397 kb on - strand, within BWI76_RS16725 at 3464.399 kb on + strand, within BWI76_RS16725 at 3464.440 kb on - strand, within BWI76_RS16725 at 3464.472 kb on - strand, within BWI76_RS16725 at 3464.526 kb on - strand, within BWI76_RS16725 at 3464.528 kb on - strand, within BWI76_RS16725 at 3464.700 kb on - strand, within BWI76_RS16725
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB26 MOI0.1 remove 3,461,398 - BWI76_RS16715 0.70 -1.0 3,461,398 - BWI76_RS16715 0.70 +0.0 3,461,442 + BWI76_RS16715 0.75 +0.2 3,461,482 - BWI76_RS16715 0.79 -0.3 3,461,497 - BWI76_RS16715 0.81 -0.2 3,461,512 - BWI76_RS16715 0.83 -0.1 3,461,562 - BWI76_RS16715 0.88 +0.0 3,461,604 - +0.4 3,461,655 - +0.3 3,461,655 - +0.4 3,461,673 - -1.5 3,461,738 - -1.8 3,461,868 - -1.0 3,461,883 + -0.8 3,461,883 + -0.1 3,461,883 + -0.8 3,461,883 + +0.7 3,461,918 - -1.5 3,461,923 - -1.2 3,461,930 + -1.3 3,462,033 + +0.1 3,462,083 + -0.6 3,462,306 - -0.8 3,462,322 + -0.3 3,462,498 + +0.3 3,462,621 + BWI76_RS16720 0.17 -0.8 3,462,629 - BWI76_RS16720 0.18 -2.1 3,462,681 + BWI76_RS16720 0.21 -0.9 3,462,731 - BWI76_RS16720 0.25 -2.4 3,463,089 - BWI76_RS16720 0.52 +0.0 3,463,421 + BWI76_RS16720 0.77 -0.5 3,463,659 - -0.7 3,463,726 + +0.5 3,463,769 - -0.8 3,463,877 + +1.8 3,464,053 - BWI76_RS16725 0.16 +0.6 3,464,184 - BWI76_RS16725 0.25 +0.7 3,464,201 - BWI76_RS16725 0.27 -0.4 3,464,274 + BWI76_RS16725 0.32 -0.9 3,464,282 + BWI76_RS16725 0.32 +0.1 3,464,365 - BWI76_RS16725 0.38 +0.6 3,464,372 + BWI76_RS16725 0.39 -1.1 3,464,397 - BWI76_RS16725 0.40 +0.5 3,464,399 + BWI76_RS16725 0.41 -0.0 3,464,440 - BWI76_RS16725 0.43 +1.0 3,464,472 - BWI76_RS16725 0.46 -0.9 3,464,526 - BWI76_RS16725 0.49 -0.2 3,464,528 - BWI76_RS16725 0.50 -0.4 3,464,700 - BWI76_RS16725 0.62 -2.4
Or see this region's nucleotide sequence