Experiment: KLEB26 MOI0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07215 and BWI76_RS07220 are separated by 162 nucleotides BWI76_RS07220 and BWI76_RS07225 are separated by 39 nucleotides
BWI76_RS07215: BWI76_RS07215 - class A extended-spectrum beta-lactamase OXY-6-4, at 1,517,815 to 1,518,690
_RS07215
BWI76_RS07220: BWI76_RS07220 - oxidoreductase NAD-binding protein, at 1,518,853 to 1,519,884
_RS07220
BWI76_RS07225: BWI76_RS07225 - putative oxidoreductase, at 1,519,924 to 1,520,931
_RS07225
Position (kb)
1518
1519
1520 Strain fitness (log2 ratio)
-1
0
1 at 1517.886 kb on - strand at 1517.889 kb on + strand at 1518.009 kb on + strand, within BWI76_RS07215 at 1518.148 kb on - strand, within BWI76_RS07215 at 1518.170 kb on - strand, within BWI76_RS07215 at 1518.172 kb on + strand, within BWI76_RS07215 at 1518.172 kb on + strand, within BWI76_RS07215 at 1518.220 kb on + strand, within BWI76_RS07215 at 1518.223 kb on - strand, within BWI76_RS07215 at 1518.225 kb on + strand, within BWI76_RS07215 at 1518.316 kb on + strand, within BWI76_RS07215 at 1518.319 kb on - strand, within BWI76_RS07215 at 1518.335 kb on - strand, within BWI76_RS07215 at 1518.444 kb on - strand, within BWI76_RS07215 at 1518.478 kb on - strand, within BWI76_RS07215 at 1518.532 kb on + strand, within BWI76_RS07215 at 1518.535 kb on - strand, within BWI76_RS07215 at 1518.535 kb on - strand, within BWI76_RS07215 at 1518.540 kb on - strand, within BWI76_RS07215 at 1518.597 kb on + strand at 1518.688 kb on - strand at 1518.697 kb on + strand at 1518.898 kb on + strand at 1518.943 kb on + strand at 1518.985 kb on - strand, within BWI76_RS07220 at 1519.007 kb on - strand, within BWI76_RS07220 at 1519.056 kb on + strand, within BWI76_RS07220 at 1519.206 kb on + strand, within BWI76_RS07220 at 1519.337 kb on - strand, within BWI76_RS07220 at 1519.443 kb on - strand, within BWI76_RS07220 at 1519.466 kb on - strand, within BWI76_RS07220 at 1519.566 kb on + strand, within BWI76_RS07220 at 1519.901 kb on - strand at 1519.990 kb on + strand at 1520.042 kb on - strand, within BWI76_RS07225 at 1520.222 kb on + strand, within BWI76_RS07225 at 1520.230 kb on - strand, within BWI76_RS07225 at 1520.485 kb on - strand, within BWI76_RS07225
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB26 MOI0.1 remove 1,517,886 - -0.8 1,517,889 + +0.5 1,518,009 + BWI76_RS07215 0.22 +0.0 1,518,148 - BWI76_RS07215 0.38 -0.4 1,518,170 - BWI76_RS07215 0.41 -0.3 1,518,172 + BWI76_RS07215 0.41 -0.3 1,518,172 + BWI76_RS07215 0.41 -0.1 1,518,220 + BWI76_RS07215 0.46 +0.3 1,518,223 - BWI76_RS07215 0.47 +1.5 1,518,225 + BWI76_RS07215 0.47 +0.6 1,518,316 + BWI76_RS07215 0.57 +0.9 1,518,319 - BWI76_RS07215 0.58 -0.2 1,518,335 - BWI76_RS07215 0.59 -0.3 1,518,444 - BWI76_RS07215 0.72 +0.3 1,518,478 - BWI76_RS07215 0.76 +0.6 1,518,532 + BWI76_RS07215 0.82 +1.2 1,518,535 - BWI76_RS07215 0.82 +0.2 1,518,535 - BWI76_RS07215 0.82 +1.5 1,518,540 - BWI76_RS07215 0.83 +0.9 1,518,597 + -0.5 1,518,688 - -0.5 1,518,697 + +0.7 1,518,898 + +0.3 1,518,943 + +1.1 1,518,985 - BWI76_RS07220 0.13 -1.5 1,519,007 - BWI76_RS07220 0.15 -0.1 1,519,056 + BWI76_RS07220 0.20 -0.3 1,519,206 + BWI76_RS07220 0.34 +1.5 1,519,337 - BWI76_RS07220 0.47 -0.4 1,519,443 - BWI76_RS07220 0.57 -1.5 1,519,466 - BWI76_RS07220 0.59 -0.2 1,519,566 + BWI76_RS07220 0.69 -0.9 1,519,901 - +0.5 1,519,990 + -1.1 1,520,042 - BWI76_RS07225 0.12 -1.0 1,520,222 + BWI76_RS07225 0.30 +0.1 1,520,230 - BWI76_RS07225 0.30 +1.1 1,520,485 - BWI76_RS07225 0.56 +0.8
Or see this region's nucleotide sequence