Experiment: KLEB31 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27860 and BWI76_RS27865 are separated by 53 nucleotides BWI76_RS27865 and BWI76_RS27870 overlap by 4 nucleotides BWI76_RS27870 and BWI76_RS27875 overlap by 11 nucleotides BWI76_RS27875 and BWI76_RS27880 are separated by 179 nucleotides
BWI76_RS27860: BWI76_RS27860 - D-serine dehydratase, at 5,778,735 to 5,780,063
_RS27860
BWI76_RS27865: BWI76_RS27865 - hypothetical protein, at 5,780,117 to 5,780,647
_RS27865
BWI76_RS27870: BWI76_RS27870 - membrane protein, at 5,780,644 to 5,781,006
_RS27870
BWI76_RS27875: BWI76_RS27875 - membrane protein, at 5,780,996 to 5,781,343
_RS27875
BWI76_RS27880: BWI76_RS27880 - 6-phospho-alpha-glucosidase, at 5,781,523 to 5,782,845
_RS27880
Position (kb) 5780
5781 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 5779.167 kb on - strand, within BWI76_RS27860 at 5779.214 kb on + strand, within BWI76_RS27860 at 5779.222 kb on - strand, within BWI76_RS27860 at 5779.290 kb on - strand, within BWI76_RS27860 at 5779.296 kb on + strand, within BWI76_RS27860 at 5779.296 kb on + strand, within BWI76_RS27860 at 5779.304 kb on - strand, within BWI76_RS27860 at 5779.384 kb on - strand, within BWI76_RS27860 at 5779.417 kb on + strand, within BWI76_RS27860 at 5779.503 kb on - strand, within BWI76_RS27860 at 5779.692 kb on - strand, within BWI76_RS27860 at 5779.811 kb on + strand, within BWI76_RS27860 at 5779.841 kb on - strand, within BWI76_RS27860 at 5779.912 kb on + strand, within BWI76_RS27860 at 5779.957 kb on + strand at 5779.976 kb on - strand at 5780.042 kb on + strand at 5780.143 kb on - strand at 5780.233 kb on + strand, within BWI76_RS27865 at 5780.289 kb on - strand, within BWI76_RS27865 at 5780.375 kb on - strand, within BWI76_RS27865 at 5780.375 kb on - strand, within BWI76_RS27865 at 5780.417 kb on + strand, within BWI76_RS27865 at 5780.600 kb on - strand at 5780.679 kb on + strand at 5780.693 kb on - strand, within BWI76_RS27870 at 5780.775 kb on + strand, within BWI76_RS27870 at 5780.917 kb on + strand, within BWI76_RS27870 at 5780.917 kb on + strand, within BWI76_RS27870 at 5780.925 kb on - strand, within BWI76_RS27870 at 5781.046 kb on + strand, within BWI76_RS27875 at 5781.091 kb on + strand, within BWI76_RS27875 at 5781.539 kb on - strand at 5781.613 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB31 MOI 1 remove 5,779,167 - BWI76_RS27860 0.33 +0.3 5,779,214 + BWI76_RS27860 0.36 +3.2 5,779,222 - BWI76_RS27860 0.37 +1.3 5,779,290 - BWI76_RS27860 0.42 -0.4 5,779,296 + BWI76_RS27860 0.42 +1.6 5,779,296 + BWI76_RS27860 0.42 +0.5 5,779,304 - BWI76_RS27860 0.43 +0.6 5,779,384 - BWI76_RS27860 0.49 +2.2 5,779,417 + BWI76_RS27860 0.51 -1.6 5,779,503 - BWI76_RS27860 0.58 -1.5 5,779,692 - BWI76_RS27860 0.72 -0.0 5,779,811 + BWI76_RS27860 0.81 -0.7 5,779,841 - BWI76_RS27860 0.83 -1.9 5,779,912 + BWI76_RS27860 0.89 -0.3 5,779,957 + -0.3 5,779,976 - -0.1 5,780,042 + -1.3 5,780,143 - +0.0 5,780,233 + BWI76_RS27865 0.22 +4.3 5,780,289 - BWI76_RS27865 0.32 -0.6 5,780,375 - BWI76_RS27865 0.49 +1.7 5,780,375 - BWI76_RS27865 0.49 -0.4 5,780,417 + BWI76_RS27865 0.56 +1.4 5,780,600 - -1.1 5,780,679 + +2.3 5,780,693 - BWI76_RS27870 0.13 +0.7 5,780,775 + BWI76_RS27870 0.36 +1.4 5,780,917 + BWI76_RS27870 0.75 +0.6 5,780,917 + BWI76_RS27870 0.75 -0.5 5,780,925 - BWI76_RS27870 0.77 +0.1 5,781,046 + BWI76_RS27875 0.14 +1.0 5,781,091 + BWI76_RS27875 0.27 -0.6 5,781,539 - -0.1 5,781,613 - -1.6
Or see this region's nucleotide sequence