Experiment: KLEB31 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26800 and BWI76_RS26805 overlap by 4 nucleotides BWI76_RS26805 and BWI76_RS26810 overlap by 4 nucleotides
BWI76_RS26800: BWI76_RS26800 - cellulose biosynthesis protein BcsE, at 5,557,019 to 5,558,575
_RS26800
BWI76_RS26805: BWI76_RS26805 - cellulose biosynthesis protein BcsF, at 5,558,572 to 5,558,769
_RS26805
BWI76_RS26810: BWI76_RS26810 - cellulose biosynthesis protein BcsG, at 5,558,766 to 5,560,442
_RS26810
Position (kb) 5558
5559 Strain fitness (log2 ratio) -1
0
1
2
3
4
5
6
7
8
9 at 5557.575 kb on + strand, within BWI76_RS26800 at 5557.583 kb on - strand, within BWI76_RS26800 at 5557.583 kb on - strand, within BWI76_RS26800 at 5557.598 kb on - strand, within BWI76_RS26800 at 5557.637 kb on - strand, within BWI76_RS26800 at 5557.645 kb on + strand, within BWI76_RS26800 at 5557.674 kb on + strand, within BWI76_RS26800 at 5557.688 kb on + strand, within BWI76_RS26800 at 5557.709 kb on + strand, within BWI76_RS26800 at 5557.716 kb on - strand, within BWI76_RS26800 at 5557.735 kb on + strand, within BWI76_RS26800 at 5557.747 kb on + strand, within BWI76_RS26800 at 5557.993 kb on - strand, within BWI76_RS26800 at 5558.006 kb on - strand, within BWI76_RS26800 at 5558.006 kb on - strand, within BWI76_RS26800 at 5558.006 kb on - strand, within BWI76_RS26800 at 5558.222 kb on - strand, within BWI76_RS26800 at 5558.226 kb on + strand at 5558.236 kb on + strand, within BWI76_RS26800 at 5558.244 kb on - strand, within BWI76_RS26800 at 5558.244 kb on - strand, within BWI76_RS26800 at 5558.244 kb on - strand, within BWI76_RS26800 at 5558.244 kb on - strand, within BWI76_RS26800 at 5558.244 kb on - strand, within BWI76_RS26800 at 5558.293 kb on + strand, within BWI76_RS26800 at 5558.318 kb on + strand, within BWI76_RS26800 at 5558.326 kb on - strand, within BWI76_RS26800 at 5558.326 kb on - strand, within BWI76_RS26800 at 5558.556 kb on - strand at 5558.610 kb on - strand, within BWI76_RS26805 at 5558.625 kb on - strand, within BWI76_RS26805 at 5558.675 kb on + strand, within BWI76_RS26805 at 5558.727 kb on + strand, within BWI76_RS26805 at 5558.869 kb on + strand at 5558.942 kb on + strand, within BWI76_RS26810 at 5558.942 kb on + strand, within BWI76_RS26810 at 5558.986 kb on + strand, within BWI76_RS26810 at 5558.986 kb on + strand, within BWI76_RS26810 at 5558.986 kb on + strand, within BWI76_RS26810 at 5558.994 kb on - strand, within BWI76_RS26810 at 5559.397 kb on + strand, within BWI76_RS26810 at 5559.405 kb on - strand, within BWI76_RS26810 at 5559.454 kb on + strand, within BWI76_RS26810 at 5559.497 kb on + strand, within BWI76_RS26810 at 5559.722 kb on + strand, within BWI76_RS26810
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB31 MOI 1 remove 5,557,575 + BWI76_RS26800 0.36 +5.0 5,557,583 - BWI76_RS26800 0.36 +5.5 5,557,583 - BWI76_RS26800 0.36 +6.3 5,557,598 - BWI76_RS26800 0.37 +5.0 5,557,637 - BWI76_RS26800 0.40 +5.3 5,557,645 + BWI76_RS26800 0.40 +3.2 5,557,674 + BWI76_RS26800 0.42 +5.5 5,557,688 + BWI76_RS26800 0.43 +5.8 5,557,709 + BWI76_RS26800 0.44 +4.9 5,557,716 - BWI76_RS26800 0.45 +5.6 5,557,735 + BWI76_RS26800 0.46 +3.6 5,557,747 + BWI76_RS26800 0.47 +3.6 5,557,993 - BWI76_RS26800 0.63 +6.6 5,558,006 - BWI76_RS26800 0.63 +4.6 5,558,006 - BWI76_RS26800 0.63 +6.1 5,558,006 - BWI76_RS26800 0.63 +6.2 5,558,222 - BWI76_RS26800 0.77 +5.9 5,558,226 + -1.0 5,558,236 + BWI76_RS26800 0.78 +2.4 5,558,244 - BWI76_RS26800 0.79 +7.0 5,558,244 - BWI76_RS26800 0.79 +5.3 5,558,244 - BWI76_RS26800 0.79 +5.1 5,558,244 - BWI76_RS26800 0.79 +5.8 5,558,244 - BWI76_RS26800 0.79 +7.3 5,558,293 + BWI76_RS26800 0.82 +2.0 5,558,318 + BWI76_RS26800 0.83 +1.2 5,558,326 - BWI76_RS26800 0.84 +5.6 5,558,326 - BWI76_RS26800 0.84 +6.6 5,558,556 - +9.3 5,558,610 - BWI76_RS26805 0.19 +7.1 5,558,625 - BWI76_RS26805 0.27 +5.4 5,558,675 + BWI76_RS26805 0.52 +2.4 5,558,727 + BWI76_RS26805 0.78 +1.1 5,558,869 + +6.1 5,558,942 + BWI76_RS26810 0.10 +6.0 5,558,942 + BWI76_RS26810 0.10 +4.7 5,558,986 + BWI76_RS26810 0.13 +4.4 5,558,986 + BWI76_RS26810 0.13 +5.1 5,558,986 + BWI76_RS26810 0.13 +6.5 5,558,994 - BWI76_RS26810 0.14 +6.7 5,559,397 + BWI76_RS26810 0.38 +5.8 5,559,405 - BWI76_RS26810 0.38 -1.0 5,559,454 + BWI76_RS26810 0.41 +4.3 5,559,497 + BWI76_RS26810 0.44 +6.0 5,559,722 + BWI76_RS26810 0.57 +6.0
Or see this region's nucleotide sequence