Experiment: KLEB31 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24365 and BWI76_RS24370 are separated by 162 nucleotides BWI76_RS24370 and BWI76_RS24375 are separated by 50 nucleotides
BWI76_RS24365: BWI76_RS24365 - hypothetical protein, at 5,078,039 to 5,079,862
_RS24365
BWI76_RS24370: BWI76_RS24370 - hypothetical protein, at 5,080,025 to 5,080,876
_RS24370
BWI76_RS24375: BWI76_RS24375 - DNA topoisomerase IV subunit B, at 5,080,927 to 5,082,822
_RS24375
Position (kb) 5080
5081 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 5079.103 kb on - strand, within BWI76_RS24365 at 5079.210 kb on + strand at 5079.210 kb on + strand, within BWI76_RS24365 at 5079.217 kb on - strand, within BWI76_RS24365 at 5079.289 kb on - strand, within BWI76_RS24365 at 5079.365 kb on + strand, within BWI76_RS24365 at 5079.508 kb on - strand, within BWI76_RS24365 at 5079.514 kb on - strand, within BWI76_RS24365 at 5079.567 kb on + strand, within BWI76_RS24365 at 5079.567 kb on + strand, within BWI76_RS24365 at 5079.567 kb on + strand, within BWI76_RS24365 at 5079.575 kb on - strand, within BWI76_RS24365 at 5079.691 kb on - strand at 5079.732 kb on + strand at 5079.749 kb on + strand at 5079.759 kb on + strand at 5079.799 kb on - strand at 5079.809 kb on - strand at 5079.859 kb on + strand at 5079.864 kb on + strand at 5079.889 kb on + strand at 5080.050 kb on + strand at 5080.067 kb on - strand at 5080.072 kb on - strand at 5080.116 kb on + strand, within BWI76_RS24370 at 5080.157 kb on + strand, within BWI76_RS24370 at 5080.192 kb on + strand, within BWI76_RS24370 at 5080.339 kb on + strand, within BWI76_RS24370 at 5080.344 kb on + strand, within BWI76_RS24370 at 5080.387 kb on + strand, within BWI76_RS24370 at 5080.616 kb on - strand, within BWI76_RS24370 at 5080.767 kb on - strand, within BWI76_RS24370 at 5080.901 kb on - strand at 5080.924 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB31 MOI 1 remove 5,079,103 - BWI76_RS24365 0.58 -0.6 5,079,210 + -2.0 5,079,210 + BWI76_RS24365 0.64 +0.4 5,079,217 - BWI76_RS24365 0.65 -0.3 5,079,289 - BWI76_RS24365 0.69 -0.8 5,079,365 + BWI76_RS24365 0.73 -0.1 5,079,508 - BWI76_RS24365 0.81 +2.0 5,079,514 - BWI76_RS24365 0.81 +0.4 5,079,567 + BWI76_RS24365 0.84 +1.4 5,079,567 + BWI76_RS24365 0.84 +0.1 5,079,567 + BWI76_RS24365 0.84 -3.2 5,079,575 - BWI76_RS24365 0.84 +1.7 5,079,691 - -0.7 5,079,732 + +1.4 5,079,749 + -0.6 5,079,759 + +0.9 5,079,799 - +0.3 5,079,809 - +0.1 5,079,859 + -0.4 5,079,864 + +3.0 5,079,889 + +1.9 5,080,050 + -1.1 5,080,067 - -0.4 5,080,072 - -0.9 5,080,116 + BWI76_RS24370 0.11 +3.9 5,080,157 + BWI76_RS24370 0.15 +1.7 5,080,192 + BWI76_RS24370 0.20 +0.6 5,080,339 + BWI76_RS24370 0.37 +0.2 5,080,344 + BWI76_RS24370 0.37 +1.1 5,080,387 + BWI76_RS24370 0.42 -0.5 5,080,616 - BWI76_RS24370 0.69 -2.0 5,080,767 - BWI76_RS24370 0.87 +0.2 5,080,901 - +0.3 5,080,924 + -0.2
Or see this region's nucleotide sequence