Experiment: KLEB31 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24055 and BWI76_RS24060 are separated by 75 nucleotides BWI76_RS24060 and BWI76_RS24065 are separated by 94 nucleotides BWI76_RS24065 and BWI76_RS24070 are separated by 90 nucleotides BWI76_RS24070 and BWI76_RS24075 are separated by 20 nucleotides
BWI76_RS24055: BWI76_RS24055 - MFS transporter, at 5,019,713 to 5,021,107
_RS24055
BWI76_RS24060: BWI76_RS24060 - SprT family protein, at 5,021,183 to 5,021,683
_RS24060
BWI76_RS24065: BWI76_RS24065 - deoxyribonuclease I, at 5,021,778 to 5,022,485
_RS24065
BWI76_RS24070: BWI76_RS24070 - 16S rRNA (uracil(1498)-N(3))-methyltransferase, at 5,022,576 to 5,023,307
_RS24070
BWI76_RS24075: BWI76_RS24075 - glutathione synthase, at 5,023,328 to 5,024,275
_RS24075
Position (kb) 5021
5022
5023 Strain fitness (log2 ratio) -2
-1
0
1 at 5020.807 kb on - strand, within BWI76_RS24055 at 5021.081 kb on - strand at 5021.275 kb on + strand, within BWI76_RS24060 at 5021.283 kb on - strand, within BWI76_RS24060 at 5021.769 kb on + strand at 5021.875 kb on - strand, within BWI76_RS24065 at 5022.161 kb on + strand, within BWI76_RS24065 at 5022.161 kb on + strand, within BWI76_RS24065 at 5022.393 kb on + strand, within BWI76_RS24065 at 5022.448 kb on - strand at 5022.678 kb on + strand, within BWI76_RS24070 at 5022.678 kb on + strand, within BWI76_RS24070 at 5022.827 kb on + strand, within BWI76_RS24070 at 5022.891 kb on - strand, within BWI76_RS24070 at 5023.064 kb on + strand, within BWI76_RS24070 at 5023.265 kb on - strand at 5023.310 kb on + strand at 5023.390 kb on - strand at 5023.483 kb on - strand, within BWI76_RS24075
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB31 MOI 1 remove 5,020,807 - BWI76_RS24055 0.78 -0.8 5,021,081 - -1.8 5,021,275 + BWI76_RS24060 0.18 +0.1 5,021,283 - BWI76_RS24060 0.20 +1.3 5,021,769 + -0.2 5,021,875 - BWI76_RS24065 0.14 -1.0 5,022,161 + BWI76_RS24065 0.54 -0.3 5,022,161 + BWI76_RS24065 0.54 -2.5 5,022,393 + BWI76_RS24065 0.87 -1.4 5,022,448 - +1.0 5,022,678 + BWI76_RS24070 0.14 -1.5 5,022,678 + BWI76_RS24070 0.14 -2.4 5,022,827 + BWI76_RS24070 0.34 -0.3 5,022,891 - BWI76_RS24070 0.43 +1.0 5,023,064 + BWI76_RS24070 0.67 +1.5 5,023,265 - -2.0 5,023,310 + +1.3 5,023,390 - -0.0 5,023,483 - BWI76_RS24075 0.16 -1.8
Or see this region's nucleotide sequence