Experiment: KLEB31 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23315 and BWI76_RS23320 are separated by 23 nucleotides BWI76_RS23320 and BWI76_RS23325 are separated by 19 nucleotides BWI76_RS23325 and BWI76_RS23330 are separated by 94 nucleotides BWI76_RS23330 and BWI76_RS23335 overlap by 40 nucleotides BWI76_RS23335 and BWI76_RS23340 overlap by 4 nucleotides
BWI76_RS23315: BWI76_RS23315 - acyl-[ACP]--phospholipid O-acyltransferase, at 4,862,058 to 4,864,217
_RS23315
BWI76_RS23320: BWI76_RS23320 - hypothetical protein, at 4,864,241 to 4,864,432
_RS23320
BWI76_RS23325: BWI76_RS23325 - hypothetical protein, at 4,864,452 to 4,864,745
_RS23325
BWI76_RS23330: BWI76_RS23330 - transcriptional regulator GalR, at 4,864,840 to 4,865,856
_RS23330
BWI76_RS23335: BWI76_RS23335 - GNAT family acetyltransferase, at 4,865,817 to 4,866,296
_RS23335
BWI76_RS23340: BWI76_RS23340 - transcriptional regulator, at 4,866,293 to 4,867,066
_RS23340
Position (kb) 4864
4865
4866 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 4863.927 kb on + strand, within BWI76_RS23315 at 4864.174 kb on - strand at 4864.174 kb on - strand at 4864.313 kb on - strand, within BWI76_RS23320 at 4864.485 kb on + strand, within BWI76_RS23325 at 4864.485 kb on + strand, within BWI76_RS23325 at 4864.495 kb on + strand, within BWI76_RS23325 at 4864.529 kb on + strand, within BWI76_RS23325 at 4864.729 kb on + strand at 4864.737 kb on - strand at 4864.753 kb on - strand at 4865.021 kb on + strand, within BWI76_RS23330 at 4865.038 kb on + strand, within BWI76_RS23330 at 4865.092 kb on + strand, within BWI76_RS23330 at 4865.276 kb on - strand, within BWI76_RS23330 at 4865.306 kb on - strand, within BWI76_RS23330 at 4865.395 kb on - strand, within BWI76_RS23330 at 4865.440 kb on + strand, within BWI76_RS23330 at 4865.517 kb on + strand, within BWI76_RS23330 at 4865.962 kb on + strand, within BWI76_RS23335 at 4865.970 kb on - strand, within BWI76_RS23335 at 4865.970 kb on - strand, within BWI76_RS23335 at 4866.007 kb on - strand, within BWI76_RS23335 at 4866.161 kb on + strand, within BWI76_RS23335 at 4866.251 kb on + strand at 4866.274 kb on + strand at 4866.283 kb on + strand at 4866.296 kb on + strand at 4866.597 kb on + strand, within BWI76_RS23340
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB31 MOI 1 remove 4,863,927 + BWI76_RS23315 0.87 +0.6 4,864,174 - +0.2 4,864,174 - -0.1 4,864,313 - BWI76_RS23320 0.38 -0.2 4,864,485 + BWI76_RS23325 0.11 -2.8 4,864,485 + BWI76_RS23325 0.11 -0.4 4,864,495 + BWI76_RS23325 0.15 +0.8 4,864,529 + BWI76_RS23325 0.26 +0.6 4,864,729 + -1.8 4,864,737 - -0.2 4,864,753 - -0.7 4,865,021 + BWI76_RS23330 0.18 -1.3 4,865,038 + BWI76_RS23330 0.19 +1.6 4,865,092 + BWI76_RS23330 0.25 +3.1 4,865,276 - BWI76_RS23330 0.43 +3.6 4,865,306 - BWI76_RS23330 0.46 +2.9 4,865,395 - BWI76_RS23330 0.55 +3.3 4,865,440 + BWI76_RS23330 0.59 +2.5 4,865,517 + BWI76_RS23330 0.67 +2.9 4,865,962 + BWI76_RS23335 0.30 +0.1 4,865,970 - BWI76_RS23335 0.32 -0.8 4,865,970 - BWI76_RS23335 0.32 -1.4 4,866,007 - BWI76_RS23335 0.40 -0.9 4,866,161 + BWI76_RS23335 0.72 +1.4 4,866,251 + -0.7 4,866,274 + -1.5 4,866,283 + -2.1 4,866,296 + -0.1 4,866,597 + BWI76_RS23340 0.39 -1.8
Or see this region's nucleotide sequence