Experiment: KLEB31 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22860 and BWI76_RS22865 are separated by 69 nucleotides BWI76_RS22865 and BWI76_RS22870 are separated by 111 nucleotides
BWI76_RS22860: BWI76_RS22860 - SecY-interacting protein, at 4,769,302 to 4,769,847
_RS22860
BWI76_RS22865: BWI76_RS22865 - NADPH-dependent 7-cyano-7-deazaguanine reductase, at 4,769,917 to 4,770,762
_RS22865
BWI76_RS22870: BWI76_RS22870 - LOG family protein, at 4,770,874 to 4,772,241
_RS22870
Position (kb)
4769
4770
4771 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4768.985 kb on - strand at 4769.116 kb on + strand at 4769.378 kb on - strand, within BWI76_RS22860 at 4769.683 kb on - strand, within BWI76_RS22860 at 4769.798 kb on + strand at 4769.826 kb on + strand at 4769.834 kb on - strand at 4769.880 kb on - strand at 4769.948 kb on - strand at 4770.001 kb on - strand at 4770.003 kb on + strand, within BWI76_RS22865 at 4770.011 kb on - strand, within BWI76_RS22865 at 4770.061 kb on - strand, within BWI76_RS22865 at 4770.091 kb on + strand, within BWI76_RS22865 at 4770.099 kb on + strand, within BWI76_RS22865 at 4770.399 kb on + strand, within BWI76_RS22865 at 4770.415 kb on - strand, within BWI76_RS22865 at 4770.442 kb on + strand, within BWI76_RS22865 at 4770.830 kb on + strand at 4770.892 kb on - strand at 4771.221 kb on - strand, within BWI76_RS22870 at 4771.287 kb on + strand, within BWI76_RS22870 at 4771.295 kb on + strand, within BWI76_RS22870 at 4771.635 kb on - strand, within BWI76_RS22870
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB31 MOI 1 remove 4,768,985 - -1.8 4,769,116 + -1.4 4,769,378 - BWI76_RS22860 0.14 +0.2 4,769,683 - BWI76_RS22860 0.70 -0.1 4,769,798 + -1.1 4,769,826 + +0.1 4,769,834 - -0.7 4,769,880 - -0.2 4,769,948 - -0.5 4,770,001 - +0.9 4,770,003 + BWI76_RS22865 0.10 -0.4 4,770,011 - BWI76_RS22865 0.11 +1.8 4,770,061 - BWI76_RS22865 0.17 +0.6 4,770,091 + BWI76_RS22865 0.21 -1.4 4,770,099 + BWI76_RS22865 0.22 +0.2 4,770,399 + BWI76_RS22865 0.57 -0.8 4,770,415 - BWI76_RS22865 0.59 -0.2 4,770,442 + BWI76_RS22865 0.62 -2.0 4,770,830 + -0.1 4,770,892 - +0.0 4,771,221 - BWI76_RS22870 0.25 +0.9 4,771,287 + BWI76_RS22870 0.30 +1.1 4,771,295 + BWI76_RS22870 0.31 +1.5 4,771,635 - BWI76_RS22870 0.56 +0.2
Or see this region's nucleotide sequence