Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17360
Experiment: KLEB31 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB31 MOI 1 |
---|---|---|---|---|---|
remove | |||||
3,597,338 | - | BWI76_RS17355 | 0.55 | +3.2 | |
3,597,382 | - | BWI76_RS17355 | 0.58 | +0.0 | |
3,597,444 | - | BWI76_RS17355 | 0.62 | -0.3 | |
3,597,522 | + | BWI76_RS17355 | 0.68 | -0.5 | |
3,597,537 | + | BWI76_RS17355 | 0.69 | -1.5 | |
3,597,545 | - | BWI76_RS17355 | 0.70 | -1.1 | |
3,597,858 | - | +0.5 | |||
3,597,879 | - | -1.3 | |||
3,598,128 | - | +0.1 | |||
3,598,212 | + | -0.2 | |||
3,598,911 | + | BWI76_RS17360 | 0.32 | -0.6 | |
3,599,059 | - | BWI76_RS17360 | 0.38 | +1.1 | |
3,599,368 | - | BWI76_RS17360 | 0.50 | -0.4 | |
3,599,576 | - | BWI76_RS17360 | 0.58 | +0.2 | |
3,599,693 | + | BWI76_RS17360 | 0.63 | +1.1 | |
3,599,826 | + | BWI76_RS17360 | 0.68 | -0.2 | |
3,599,923 | + | BWI76_RS17360 | 0.71 | +0.8 | |
3,600,207 | - | BWI76_RS17360 | 0.82 | -0.7 | |
3,600,218 | - | BWI76_RS17360 | 0.83 | +4.3 | |
3,601,110 | + | BWI76_RS17365 | 0.11 | -0.1 | |
3,601,270 | + | BWI76_RS17365 | 0.15 | -0.8 | |
3,601,567 | - | BWI76_RS17365 | 0.22 | +0.6 |
Or see this region's nucleotide sequence