Experiment: KLEB31 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14520 and BWI76_RS14525 are separated by 165 nucleotides BWI76_RS14525 and BWI76_RS14530 are separated by 182 nucleotides
BWI76_RS14520: BWI76_RS14520 - hypothetical protein, at 3,032,908 to 3,034,710
_RS14520
BWI76_RS14525: BWI76_RS14525 - AraC family transcriptional regulator, at 3,034,876 to 3,035,835
_RS14525
BWI76_RS14530: BWI76_RS14530 - non-ribosomal peptide synthetase, at 3,036,018 to 3,042,116
_RS14530
Position (kb)
3034
3035
3036 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3034.100 kb on + strand, within BWI76_RS14520 at 3034.181 kb on - strand, within BWI76_RS14520 at 3034.362 kb on + strand, within BWI76_RS14520 at 3034.391 kb on - strand, within BWI76_RS14520 at 3034.451 kb on + strand, within BWI76_RS14520 at 3034.481 kb on - strand, within BWI76_RS14520 at 3034.539 kb on - strand at 3034.541 kb on - strand at 3034.832 kb on + strand at 3034.845 kb on - strand at 3034.847 kb on + strand at 3034.996 kb on + strand, within BWI76_RS14525 at 3035.061 kb on + strand, within BWI76_RS14525 at 3035.205 kb on - strand, within BWI76_RS14525 at 3035.230 kb on - strand, within BWI76_RS14525 at 3035.456 kb on + strand, within BWI76_RS14525 at 3035.754 kb on - strand at 3035.754 kb on - strand at 3036.162 kb on + strand at 3036.170 kb on - strand at 3036.170 kb on - strand at 3036.808 kb on - strand, within BWI76_RS14530
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB31 MOI 1 remove 3,034,100 + BWI76_RS14520 0.66 -2.2 3,034,181 - BWI76_RS14520 0.71 -1.4 3,034,362 + BWI76_RS14520 0.81 +0.6 3,034,391 - BWI76_RS14520 0.82 +0.3 3,034,451 + BWI76_RS14520 0.86 +0.5 3,034,481 - BWI76_RS14520 0.87 +1.3 3,034,539 - +0.1 3,034,541 - +0.7 3,034,832 + +2.3 3,034,845 - -1.2 3,034,847 + -1.1 3,034,996 + BWI76_RS14525 0.12 +1.1 3,035,061 + BWI76_RS14525 0.19 -0.7 3,035,205 - BWI76_RS14525 0.34 +1.4 3,035,230 - BWI76_RS14525 0.37 +0.4 3,035,456 + BWI76_RS14525 0.60 +0.8 3,035,754 - +1.3 3,035,754 - -0.3 3,036,162 + -1.1 3,036,170 - +0.4 3,036,170 - -1.5 3,036,808 - BWI76_RS14530 0.13 -0.4
Or see this region's nucleotide sequence