Experiment: KLEB31 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS12800 and BWI76_RS12805 overlap by 1 nucleotides BWI76_RS12805 and BWI76_RS12810 are separated by 7 nucleotides BWI76_RS12810 and BWI76_RS12815 are separated by 0 nucleotides BWI76_RS12815 and BWI76_RS12820 are separated by 235 nucleotides
BWI76_RS12800: BWI76_RS12800 - hypothetical protein, at 2,666,957 to 2,669,596
_RS12800
BWI76_RS12805: BWI76_RS12805 - YnbE family lipoprotein, at 2,669,596 to 2,669,781
_RS12805
BWI76_RS12810: BWI76_RS12810 - hypothetical protein, at 2,669,789 to 2,670,112
_RS12810
BWI76_RS12815: BWI76_RS12815 - transcriptional regulator FeaR, at 2,670,113 to 2,671,021
_RS12815
BWI76_RS12820: BWI76_RS12820 - NAD-dependent phenylacetaldehyde dehydrogenase, at 2,671,257 to 2,672,756
_RS12820
Position (kb)
2670
2671
2672 Strain fitness (log2 ratio)
-1
0
1
2 at 2669.147 kb on - strand, within BWI76_RS12800 at 2669.173 kb on + strand, within BWI76_RS12800 at 2669.337 kb on + strand at 2669.345 kb on - strand at 2670.529 kb on + strand, within BWI76_RS12815 at 2670.614 kb on + strand, within BWI76_RS12815 at 2671.231 kb on - strand at 2671.242 kb on + strand at 2671.441 kb on + strand, within BWI76_RS12820 at 2671.485 kb on + strand, within BWI76_RS12820 at 2671.493 kb on - strand, within BWI76_RS12820 at 2671.581 kb on - strand, within BWI76_RS12820 at 2671.609 kb on + strand at 2671.970 kb on - strand, within BWI76_RS12820
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB31 MOI 1 remove 2,669,147 - BWI76_RS12800 0.83 -0.4 2,669,173 + BWI76_RS12800 0.84 -0.7 2,669,337 + +0.7 2,669,345 - -0.6 2,670,529 + BWI76_RS12815 0.46 -1.5 2,670,614 + BWI76_RS12815 0.55 -0.7 2,671,231 - +1.7 2,671,242 + +0.5 2,671,441 + BWI76_RS12820 0.12 -1.6 2,671,485 + BWI76_RS12820 0.15 +0.0 2,671,493 - BWI76_RS12820 0.16 +1.0 2,671,581 - BWI76_RS12820 0.22 +0.2 2,671,609 + +2.0 2,671,970 - BWI76_RS12820 0.48 +1.1
Or see this region's nucleotide sequence