Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12700
Experiment: KLEB31 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB31 MOI 1 |
---|---|---|---|---|---|
remove | |||||
2,647,035 | - | BWI76_RS12695 | 0.28 | -0.8 | |
2,647,127 | + | BWI76_RS12695 | 0.38 | +0.5 | |
2,647,398 | + | BWI76_RS12695 | 0.65 | -0.3 | |
2,647,475 | - | BWI76_RS12695 | 0.73 | -1.6 | |
2,647,581 | + | BWI76_RS12695 | 0.84 | -0.0 | |
2,647,706 | + | -1.1 | |||
2,647,840 | + | -0.5 | |||
2,647,864 | + | +0.9 | |||
2,647,872 | - | -1.0 | |||
2,648,068 | + | BWI76_RS12700 | 0.19 | +1.8 | |
2,648,076 | - | BWI76_RS12700 | 0.22 | +1.7 | |
2,648,396 | + | BWI76_RS12705 | 0.13 | -0.6 | |
2,648,424 | - | BWI76_RS12705 | 0.15 | +0.1 | |
2,648,438 | - | BWI76_RS12705 | 0.16 | -0.2 | |
2,648,438 | - | BWI76_RS12705 | 0.16 | +1.2 | |
2,648,662 | + | BWI76_RS12705 | 0.32 | -0.8 | |
2,648,673 | + | BWI76_RS12705 | 0.33 | +0.6 | |
2,648,815 | + | BWI76_RS12705 | 0.43 | -0.6 | |
2,649,044 | + | BWI76_RS12705 | 0.60 | +1.9 | |
2,649,044 | + | BWI76_RS12705 | 0.60 | +0.5 |
Or see this region's nucleotide sequence