Experiment: KLEB31 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09690 and BWI76_RS09695 are separated by 274 nucleotides BWI76_RS09695 and BWI76_RS09700 are separated by 42 nucleotides BWI76_RS09700 and BWI76_RS09705 are separated by 42 nucleotides
BWI76_RS09690: BWI76_RS09690 - dimethyl sulfoxide reductase, at 2,031,761 to 2,032,624
_RS09690
BWI76_RS09695: BWI76_RS09695 - MFS transporter, at 2,032,899 to 2,034,047
_RS09695
BWI76_RS09700: BWI76_RS09700 - PTS IIA-like nitrogen-regulatory protein PtsN, at 2,034,090 to 2,034,527
_RS09700
BWI76_RS09705: BWI76_RS09705 - transketolase, at 2,034,570 to 2,035,481
_RS09705
Position (kb)
2032
2033
2034
2035 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2032.470 kb on - strand, within BWI76_RS09690 at 2032.503 kb on - strand, within BWI76_RS09690 at 2032.643 kb on + strand at 2032.881 kb on + strand at 2032.889 kb on + strand at 2032.906 kb on + strand at 2032.920 kb on + strand at 2033.157 kb on + strand, within BWI76_RS09695 at 2033.255 kb on + strand, within BWI76_RS09695 at 2033.485 kb on + strand, within BWI76_RS09695 at 2033.644 kb on + strand, within BWI76_RS09695 at 2033.706 kb on + strand, within BWI76_RS09695 at 2033.714 kb on - strand, within BWI76_RS09695 at 2033.887 kb on + strand, within BWI76_RS09695 at 2034.049 kb on - strand at 2034.370 kb on - strand, within BWI76_RS09700 at 2034.588 kb on - strand at 2034.588 kb on - strand at 2034.774 kb on + strand, within BWI76_RS09705 at 2035.011 kb on + strand, within BWI76_RS09705 at 2035.019 kb on - strand, within BWI76_RS09705 at 2035.019 kb on - strand, within BWI76_RS09705
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB31 MOI 1 remove 2,032,470 - BWI76_RS09690 0.82 -1.7 2,032,503 - BWI76_RS09690 0.86 -1.8 2,032,643 + -0.1 2,032,881 + -0.3 2,032,889 + +0.1 2,032,906 + -1.3 2,032,920 + +0.1 2,033,157 + BWI76_RS09695 0.22 -1.8 2,033,255 + BWI76_RS09695 0.31 +1.0 2,033,485 + BWI76_RS09695 0.51 +0.4 2,033,644 + BWI76_RS09695 0.65 +0.9 2,033,706 + BWI76_RS09695 0.70 -1.8 2,033,714 - BWI76_RS09695 0.71 +2.6 2,033,887 + BWI76_RS09695 0.86 -1.5 2,034,049 - -1.0 2,034,370 - BWI76_RS09700 0.64 -0.1 2,034,588 - +0.9 2,034,588 - +1.3 2,034,774 + BWI76_RS09705 0.22 -0.8 2,035,011 + BWI76_RS09705 0.48 -1.6 2,035,019 - BWI76_RS09705 0.49 +0.9 2,035,019 - BWI76_RS09705 0.49 +0.0
Or see this region's nucleotide sequence