Experiment: KLEB31 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08780 and BWI76_RS08785 are separated by 701 nucleotides BWI76_RS08785 and BWI76_RS08790 are separated by 301 nucleotides
BWI76_RS08780: BWI76_RS08780 - ABC transporter, at 1,850,003 to 1,850,725
_RS08780
BWI76_RS08785: BWI76_RS08785 - excinuclease ABC subunit B, at 1,851,427 to 1,853,442
_RS08785
BWI76_RS08790: BWI76_RS08790 - two-component sensor histidine kinase, at 1,853,744 to 1,854,841
_RS08790
Position (kb)
1851
1852
1853
1854 Strain fitness (log2 ratio)
-1
0
1
2 at 1850.583 kb on + strand, within BWI76_RS08780 at 1850.997 kb on - strand at 1851.425 kb on - strand at 1851.517 kb on + strand at 1851.642 kb on + strand, within BWI76_RS08785 at 1851.923 kb on + strand, within BWI76_RS08785 at 1851.940 kb on + strand, within BWI76_RS08785 at 1852.060 kb on - strand, within BWI76_RS08785 at 1852.064 kb on + strand, within BWI76_RS08785 at 1852.297 kb on - strand, within BWI76_RS08785 at 1852.436 kb on - strand, within BWI76_RS08785 at 1852.618 kb on - strand, within BWI76_RS08785 at 1852.951 kb on + strand, within BWI76_RS08785 at 1853.174 kb on + strand, within BWI76_RS08785 at 1853.232 kb on - strand, within BWI76_RS08785 at 1853.424 kb on + strand at 1853.458 kb on + strand at 1853.572 kb on - strand at 1853.578 kb on - strand at 1853.666 kb on - strand at 1853.800 kb on + strand at 1853.856 kb on - strand, within BWI76_RS08790 at 1853.876 kb on + strand, within BWI76_RS08790 at 1854.135 kb on - strand, within BWI76_RS08790 at 1854.340 kb on + strand, within BWI76_RS08790 at 1854.340 kb on + strand, within BWI76_RS08790 at 1854.370 kb on - strand, within BWI76_RS08790
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB31 MOI 1 remove 1,850,583 + BWI76_RS08780 0.80 +0.8 1,850,997 - +2.5 1,851,425 - -0.4 1,851,517 + +0.1 1,851,642 + BWI76_RS08785 0.11 +0.5 1,851,923 + BWI76_RS08785 0.25 +1.4 1,851,940 + BWI76_RS08785 0.25 -0.1 1,852,060 - BWI76_RS08785 0.31 +1.0 1,852,064 + BWI76_RS08785 0.32 +0.9 1,852,297 - BWI76_RS08785 0.43 +1.0 1,852,436 - BWI76_RS08785 0.50 +1.0 1,852,618 - BWI76_RS08785 0.59 +0.4 1,852,951 + BWI76_RS08785 0.76 -0.1 1,853,174 + BWI76_RS08785 0.87 -0.7 1,853,232 - BWI76_RS08785 0.90 +2.4 1,853,424 + -0.8 1,853,458 + +1.1 1,853,572 - +0.1 1,853,578 - +1.4 1,853,666 - +0.9 1,853,800 + -0.1 1,853,856 - BWI76_RS08790 0.10 -1.0 1,853,876 + BWI76_RS08790 0.12 -0.4 1,854,135 - BWI76_RS08790 0.36 -0.0 1,854,340 + BWI76_RS08790 0.54 +0.7 1,854,340 + BWI76_RS08790 0.54 -1.0 1,854,370 - BWI76_RS08790 0.57 +0.4
Or see this region's nucleotide sequence