Experiment: KLEB31 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07755 and BWI76_RS07760 overlap by 1 nucleotides BWI76_RS07760 and BWI76_RS07765 are separated by 0 nucleotides BWI76_RS07765 and BWI76_RS07770 are separated by 122 nucleotides BWI76_RS07770 and BWI76_RS07775 are separated by 39 nucleotides
BWI76_RS07755: BWI76_RS07755 - isochorismatase, at 1,646,122 to 1,646,973
_RS07755
BWI76_RS07760: BWI76_RS07760 - 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, at 1,646,973 to 1,647,728
_RS07760
BWI76_RS07765: BWI76_RS07765 - thioesterase, at 1,647,729 to 1,648,142
_RS07765
BWI76_RS07770: BWI76_RS07770 - hypothetical protein, at 1,648,265 to 1,648,485
_RS07770
BWI76_RS07775: BWI76_RS07775 - carbon starvation protein A, at 1,648,525 to 1,650,630
_RS07775
Position (kb) 1647
1648
1649 Strain fitness (log2 ratio) -1
0
1
2
3 at 1647.053 kb on - strand, within BWI76_RS07760 at 1647.090 kb on - strand, within BWI76_RS07760 at 1647.138 kb on - strand, within BWI76_RS07760 at 1647.365 kb on - strand, within BWI76_RS07760 at 1647.429 kb on + strand, within BWI76_RS07760 at 1647.815 kb on - strand, within BWI76_RS07765 at 1647.825 kb on - strand, within BWI76_RS07765 at 1647.873 kb on - strand, within BWI76_RS07765 at 1648.232 kb on - strand at 1648.420 kb on - strand, within BWI76_RS07770 at 1648.512 kb on + strand at 1648.553 kb on + strand at 1648.912 kb on + strand, within BWI76_RS07775 at 1649.092 kb on - strand, within BWI76_RS07775
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB31 MOI 1 remove 1,647,053 - BWI76_RS07760 0.11 -0.5 1,647,090 - BWI76_RS07760 0.15 +2.1 1,647,138 - BWI76_RS07760 0.22 +0.8 1,647,365 - BWI76_RS07760 0.52 -0.6 1,647,429 + BWI76_RS07760 0.60 -1.0 1,647,815 - BWI76_RS07765 0.21 +0.9 1,647,825 - BWI76_RS07765 0.23 -0.9 1,647,873 - BWI76_RS07765 0.35 +1.8 1,648,232 - +1.0 1,648,420 - BWI76_RS07770 0.70 +1.1 1,648,512 + +3.0 1,648,553 + -0.5 1,648,912 + BWI76_RS07775 0.18 +0.3 1,649,092 - BWI76_RS07775 0.27 +1.3
Or see this region's nucleotide sequence