Experiment: KLEB31 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07315 and BWI76_RS07320 are separated by 136 nucleotides BWI76_RS07320 and BWI76_RS07325 are separated by 165 nucleotides
BWI76_RS07315: BWI76_RS07315 - PTS sugar transporter, at 1,540,518 to 1,541,888
_RS07315
BWI76_RS07320: BWI76_RS07320 - carbohydrate porin, at 1,542,025 to 1,543,542
_RS07320
BWI76_RS07325: BWI76_RS07325 - aminoimidazole riboside kinase, at 1,543,708 to 1,544,631
_RS07325
Position (kb)
1542
1543
1544 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1541.183 kb on - strand, within BWI76_RS07315 at 1541.310 kb on - strand, within BWI76_RS07315 at 1541.316 kb on - strand, within BWI76_RS07315 at 1542.238 kb on - strand, within BWI76_RS07320 at 1542.384 kb on + strand, within BWI76_RS07320 at 1542.441 kb on + strand, within BWI76_RS07320 at 1542.441 kb on + strand, within BWI76_RS07320 at 1542.536 kb on + strand, within BWI76_RS07320 at 1542.536 kb on + strand, within BWI76_RS07320 at 1542.536 kb on + strand at 1542.536 kb on - strand, within BWI76_RS07320 at 1542.544 kb on - strand, within BWI76_RS07320 at 1542.748 kb on - strand, within BWI76_RS07320 at 1542.933 kb on + strand, within BWI76_RS07320 at 1543.915 kb on - strand, within BWI76_RS07325 at 1543.915 kb on - strand, within BWI76_RS07325 at 1543.984 kb on + strand, within BWI76_RS07325 at 1544.127 kb on + strand, within BWI76_RS07325 at 1544.247 kb on + strand, within BWI76_RS07325 at 1544.250 kb on - strand, within BWI76_RS07325 at 1544.321 kb on - strand, within BWI76_RS07325 at 1544.361 kb on + strand, within BWI76_RS07325 at 1544.461 kb on + strand, within BWI76_RS07325
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB31 MOI 1 remove 1,541,183 - BWI76_RS07315 0.49 -0.9 1,541,310 - BWI76_RS07315 0.58 +0.3 1,541,316 - BWI76_RS07315 0.58 -0.2 1,542,238 - BWI76_RS07320 0.14 -0.9 1,542,384 + BWI76_RS07320 0.24 +1.2 1,542,441 + BWI76_RS07320 0.27 -0.6 1,542,441 + BWI76_RS07320 0.27 -0.5 1,542,536 + BWI76_RS07320 0.34 -0.4 1,542,536 + BWI76_RS07320 0.34 +1.0 1,542,536 + +1.1 1,542,536 - BWI76_RS07320 0.34 -0.8 1,542,544 - BWI76_RS07320 0.34 -1.1 1,542,748 - BWI76_RS07320 0.48 -0.2 1,542,933 + BWI76_RS07320 0.60 -0.8 1,543,915 - BWI76_RS07325 0.22 +1.5 1,543,915 - BWI76_RS07325 0.22 -0.5 1,543,984 + BWI76_RS07325 0.30 +1.4 1,544,127 + BWI76_RS07325 0.45 -0.7 1,544,247 + BWI76_RS07325 0.58 -2.2 1,544,250 - BWI76_RS07325 0.59 -1.6 1,544,321 - BWI76_RS07325 0.66 -3.0 1,544,361 + BWI76_RS07325 0.71 +0.1 1,544,461 + BWI76_RS07325 0.81 -0.6
Or see this region's nucleotide sequence