Experiment: KLEB31 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07295 and BWI76_RS07300 overlap by 4 nucleotides BWI76_RS07300 and BWI76_RS07305 are separated by 146 nucleotides
BWI76_RS07295: BWI76_RS07295 - 6-phospho-beta-glucosidase, at 1,535,676 to 1,537,100
_RS07295
BWI76_RS07300: BWI76_RS07300 - antitermination protein BlgG, at 1,537,097 to 1,537,936
_RS07300
BWI76_RS07305: BWI76_RS07305 - sucrose operon repressor, at 1,538,083 to 1,539,087
_RS07305
Position (kb)
1537
1538 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1536.102 kb on - strand, within BWI76_RS07295 at 1536.109 kb on + strand, within BWI76_RS07295 at 1536.284 kb on + strand, within BWI76_RS07295 at 1536.373 kb on - strand, within BWI76_RS07295 at 1536.423 kb on - strand, within BWI76_RS07295 at 1536.664 kb on - strand, within BWI76_RS07295 at 1536.788 kb on + strand, within BWI76_RS07295 at 1536.811 kb on - strand, within BWI76_RS07295 at 1536.941 kb on + strand, within BWI76_RS07295 at 1536.949 kb on - strand, within BWI76_RS07295 at 1537.184 kb on + strand, within BWI76_RS07300 at 1537.280 kb on - strand, within BWI76_RS07300 at 1537.280 kb on - strand, within BWI76_RS07300 at 1537.377 kb on + strand, within BWI76_RS07300 at 1537.588 kb on + strand, within BWI76_RS07300 at 1537.658 kb on + strand, within BWI76_RS07300 at 1537.665 kb on + strand, within BWI76_RS07300 at 1537.732 kb on + strand, within BWI76_RS07300 at 1537.863 kb on + strand at 1537.899 kb on + strand at 1537.949 kb on - strand at 1538.138 kb on - strand at 1538.412 kb on - strand, within BWI76_RS07305 at 1538.461 kb on + strand, within BWI76_RS07305 at 1538.597 kb on + strand, within BWI76_RS07305 at 1538.667 kb on + strand, within BWI76_RS07305 at 1538.667 kb on + strand, within BWI76_RS07305 at 1538.801 kb on - strand, within BWI76_RS07305 at 1538.907 kb on + strand, within BWI76_RS07305
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB31 MOI 1 remove 1,536,102 - BWI76_RS07295 0.30 -0.5 1,536,109 + BWI76_RS07295 0.30 +2.2 1,536,284 + BWI76_RS07295 0.43 -1.4 1,536,373 - BWI76_RS07295 0.49 +0.5 1,536,423 - BWI76_RS07295 0.52 +1.2 1,536,664 - BWI76_RS07295 0.69 -0.9 1,536,788 + BWI76_RS07295 0.78 +0.2 1,536,811 - BWI76_RS07295 0.80 +1.0 1,536,941 + BWI76_RS07295 0.89 -2.8 1,536,949 - BWI76_RS07295 0.89 +0.9 1,537,184 + BWI76_RS07300 0.10 +0.0 1,537,280 - BWI76_RS07300 0.22 -0.2 1,537,280 - BWI76_RS07300 0.22 +1.5 1,537,377 + BWI76_RS07300 0.33 -0.6 1,537,588 + BWI76_RS07300 0.58 -0.0 1,537,658 + BWI76_RS07300 0.67 -0.5 1,537,665 + BWI76_RS07300 0.68 -2.5 1,537,732 + BWI76_RS07300 0.76 -0.3 1,537,863 + +0.2 1,537,899 + -2.1 1,537,949 - -1.1 1,538,138 - +0.5 1,538,412 - BWI76_RS07305 0.33 +0.5 1,538,461 + BWI76_RS07305 0.38 +1.0 1,538,597 + BWI76_RS07305 0.51 -0.9 1,538,667 + BWI76_RS07305 0.58 +0.2 1,538,667 + BWI76_RS07305 0.58 -1.5 1,538,801 - BWI76_RS07305 0.71 -0.6 1,538,907 + BWI76_RS07305 0.82 -2.6
Or see this region's nucleotide sequence