Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07285
Experiment: KLEB31 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB31 MOI 1 |
---|---|---|---|---|---|
remove | |||||
1,531,658 | - | BWI76_RS07280 | 0.13 | -0.1 | |
1,531,974 | - | BWI76_RS07280 | 0.46 | -0.7 | |
1,532,024 | + | BWI76_RS07280 | 0.51 | -0.7 | |
1,532,068 | - | BWI76_RS07280 | 0.56 | -1.3 | |
1,532,272 | + | BWI76_RS07280 | 0.77 | -1.6 | |
1,532,340 | + | BWI76_RS07280 | 0.85 | -0.7 | |
1,532,395 | + | -0.1 | |||
1,532,405 | - | -0.1 | |||
1,532,405 | - | -0.4 | |||
1,532,410 | + | +0.1 | |||
1,532,416 | - | -0.4 | |||
1,532,418 | - | +0.0 | |||
1,532,446 | + | -0.5 | |||
1,532,477 | - | -2.4 | |||
1,532,501 | - | -1.4 | |||
1,532,632 | + | -1.3 | |||
1,532,640 | - | -0.5 | |||
1,532,819 | - | BWI76_RS07285 | 0.17 | -0.2 | |
1,532,945 | + | BWI76_RS07285 | 0.31 | +0.9 | |
1,532,954 | - | BWI76_RS07285 | 0.32 | -0.2 | |
1,533,209 | + | BWI76_RS07285 | 0.59 | +0.8 | |
1,533,407 | - | BWI76_RS07285 | 0.81 | -1.9 | |
1,533,439 | - | BWI76_RS07285 | 0.84 | +0.1 | |
1,533,521 | + | +0.2 | |||
1,533,550 | - | +1.1 | |||
1,533,550 | - | +0.3 | |||
1,533,562 | + | -0.4 | |||
1,533,923 | - | +0.8 | |||
1,533,954 | - | +0.4 | |||
1,534,011 | + | BWI76_RS07290 | 0.11 | -0.6 | |
1,534,124 | + | BWI76_RS07290 | 0.17 | -0.7 | |
1,534,132 | - | BWI76_RS07290 | 0.18 | +0.2 | |
1,534,156 | + | BWI76_RS07290 | 0.19 | -1.4 | |
1,534,289 | - | BWI76_RS07290 | 0.26 | +0.0 |
Or see this region's nucleotide sequence