Experiment: KLEB31 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06095 and BWI76_RS06100 are separated by 200 nucleotides BWI76_RS06100 and BWI76_RS06105 are separated by 117 nucleotides
BWI76_RS06095: BWI76_RS06095 - D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH, at 1,281,598 to 1,282,758
_RS06095
BWI76_RS06100: BWI76_RS06100 - isochorismatase family protein, at 1,282,959 to 1,283,492
_RS06100
BWI76_RS06105: BWI76_RS06105 - microcin B17 transporter, at 1,283,610 to 1,284,830
_RS06105
Position (kb)
1282
1283
1284 Strain fitness (log2 ratio)
-1
0
1
2 at 1282.085 kb on - strand, within BWI76_RS06095 at 1282.097 kb on - strand, within BWI76_RS06095 at 1282.148 kb on + strand, within BWI76_RS06095 at 1282.207 kb on + strand, within BWI76_RS06095 at 1282.261 kb on + strand, within BWI76_RS06095 at 1282.321 kb on - strand, within BWI76_RS06095 at 1282.461 kb on - strand, within BWI76_RS06095 at 1282.682 kb on + strand at 1282.716 kb on + strand at 1282.990 kb on - strand at 1283.110 kb on + strand, within BWI76_RS06100 at 1283.274 kb on + strand, within BWI76_RS06100 at 1283.407 kb on - strand, within BWI76_RS06100 at 1283.413 kb on + strand, within BWI76_RS06100 at 1283.427 kb on + strand, within BWI76_RS06100 at 1283.486 kb on + strand at 1283.542 kb on + strand at 1283.573 kb on - strand at 1283.601 kb on - strand at 1283.665 kb on + strand at 1283.723 kb on - strand at 1283.836 kb on - strand, within BWI76_RS06105 at 1283.963 kb on + strand, within BWI76_RS06105 at 1284.006 kb on - strand, within BWI76_RS06105 at 1284.006 kb on - strand, within BWI76_RS06105 at 1284.064 kb on - strand, within BWI76_RS06105 at 1284.210 kb on + strand, within BWI76_RS06105 at 1284.389 kb on + strand, within BWI76_RS06105 at 1284.402 kb on - strand, within BWI76_RS06105 at 1284.461 kb on - strand, within BWI76_RS06105 at 1284.466 kb on - strand, within BWI76_RS06105
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB31 MOI 1 remove 1,282,085 - BWI76_RS06095 0.42 +1.1 1,282,097 - BWI76_RS06095 0.43 -0.5 1,282,148 + BWI76_RS06095 0.47 -1.4 1,282,207 + BWI76_RS06095 0.52 +0.8 1,282,261 + BWI76_RS06095 0.57 +1.7 1,282,321 - BWI76_RS06095 0.62 -1.1 1,282,461 - BWI76_RS06095 0.74 +1.5 1,282,682 + +0.6 1,282,716 + +0.1 1,282,990 - +0.3 1,283,110 + BWI76_RS06100 0.28 +0.5 1,283,274 + BWI76_RS06100 0.59 -0.9 1,283,407 - BWI76_RS06100 0.84 -0.5 1,283,413 + BWI76_RS06100 0.85 -0.1 1,283,427 + BWI76_RS06100 0.88 -1.3 1,283,486 + +1.5 1,283,542 + +0.6 1,283,573 - +2.4 1,283,601 - +0.6 1,283,665 + +1.1 1,283,723 - -0.8 1,283,836 - BWI76_RS06105 0.19 +2.6 1,283,963 + BWI76_RS06105 0.29 -0.3 1,284,006 - BWI76_RS06105 0.32 +0.7 1,284,006 - BWI76_RS06105 0.32 -0.0 1,284,064 - BWI76_RS06105 0.37 +0.2 1,284,210 + BWI76_RS06105 0.49 +0.5 1,284,389 + BWI76_RS06105 0.64 +0.5 1,284,402 - BWI76_RS06105 0.65 -0.4 1,284,461 - BWI76_RS06105 0.70 +0.4 1,284,466 - BWI76_RS06105 0.70 +1.6
Or see this region's nucleotide sequence